Granulibacter bethesdensis NIH3.1: GbCGDNIH3_2351
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Entry
GbCGDNIH3_2351 CDS
T03155
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Pathway
gbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GbCGDNIH3_2351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbc03019
]
GbCGDNIH3_2351
03016 Transfer RNA biogenesis [BR:
gbc03016
]
GbCGDNIH3_2351
Enzymes [BR:
gbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GbCGDNIH3_2351
Messenger RNA biogenesis [BR:
gbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GbCGDNIH3_2351
Transfer RNA biogenesis [BR:
gbc03016
]
Prokaryotic type
tRNA degradation factors
GbCGDNIH3_2351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AHJ64258
UniProt:
A0AAN0RFW9
LinkDB
All DBs
Position
complement(2621727..2623889)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNYFRKELDLGGRTLVLETGKIARQADGAVLARLGDTIVLCTAVGAKSAKAGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEHETLVSRLIDRPIRPLFPEGFYNEVQVIATVLSH
DMENDPDIVALIGCSAALTLSGIPFFGPVAASRVGLVNGAFVLNPTLEQRAESKLDLVVA
GTAEGVLMVESEAEELSEDQMLAAVEFGHKGFQPVIDAIIALAEHAARDPWTLPEQNPEH
VALKQRLNEAGRTLLGNAYQEKVKQLRQEKISAAKKQIIETLGIGGTPEESIAKSMLKDL
EADIVRNAILDTGIRIDGRDTRTVRPIIGEVGILPRAHGSALFTRGETQALCVATLGTGQ
DEQVVDALTGEYRSHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVHPVLPAKDA
FPYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPLKRPVAGIAMGLIKEDRAFAVLSD
ILGDEDHLGDMDFKVAGTEQGVTSLQMDIKITSITTEIMRTALQQARDGRMHILGEMAKA
ITGARGSVAATAPRITVINVPKEKIREVIGTGGKVIREIVEFSGAKIDIEDDGTIKIAST
SEESTQKAIDRIQGIVAEPEVGKIYNGKVVKTADFGAFVNFLGSRDGLVHISELQQGRVN
KTSDVINVGDVVKVKVLGFDDRGKVKLSMRLVDQTTGEDISDKVGPKGGRGGRGEGDLAE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattatttccgcaaggaactcgatctgggtggacgcacgctggtactggaaacg
ggcaagatcgcccgccaggccgacggtgccgttctggcccggctgggtgacaccatcgtt
ctgtgtacagcggtgggtgcgaaatccgcaaaggccggtcaggatttcttcccgctgacc
gtcaactatcaggaaaaagctttcgccgcgggcaagatccccggcggcttcttcaagcgt
gagggccgtcccagcgagcatgagaccctggtctcccgcctgatcgaccgtccgatccgc
ccgttgtttccggaagggttctataacgaggttcaggtcatcgccaccgtgctgtcgcac
gatatggagaacgatccggatattgtcgccctgatcggttgctccgcggcgctgaccctg
tccggcattccgttcttcggcccggtcgcggcgtctcgcgtcggtctggtgaatggcgca
ttcgtgctgaaccccacccttgagcagcgcgctgaaagcaagctggatctggtggtcgcc
ggtaccgcggaaggcgtgctgatggtcgagagcgaggccgaagagctgagcgaagaccag
atgctggccgccgttgaattcggccataaaggcttccagccggtgatcgatgcgatcatc
gccctggctgaacacgccgcccgcgatccctggaccctgcccgagcagaatccggagcat
gtcgcgctgaagcagcgcctgaacgaggccggccgcaccctgctgggcaatgcctatcag
gaaaaggtgaagcagctccgccaggagaagatttccgccgccaagaagcagattatcgaa
acgctgggtatcggtggtacaccggaagaatccatcgccaagtcgatgctgaaggatctg
gaagcggatatcgtccggaatgcgatcctcgataccggtatccgcattgatggtcgtgac
acccgcactgtgcgcccgatcatcggcgaggtcggcattctgccgcgcgcccatggctcc
gcgctgttcacccgtggtgaaacgcaggcgctctgcgtggccacgctgggcaccgggcag
gatgagcaggtggtggacgccctgaccggcgaatatcgcagccatttcatgctgcactac
aacttccctccctactccgtgggtgaggccggccgtatgggcagcccgggccgtcgtgaa
atcggccatggcaagctggcctggcgcgccgttcatccggtgctgccggccaaggacgcc
ttcccctacaccctgcgcgtggtcagcgagatcacggagagcaatggctcgtcctccatg
gcgaccgtatgcggttcctctctggcgctgatggatgcgggcgtgccgctgaagcgtccg
gtggctggtatcgccatgggcctgatcaaggaagatcgcgcctttgccgtgctgtccgac
attctcggcgatgaagatcacctcggtgacatggatttcaaggtggccggaaccgagcag
ggcgtgacctccctgcagatggacatcaagatcacctccatcaccaccgagatcatgcgc
accgccctgcagcaggcccgtgacggccgcatgcatattctgggcgagatggcgaaagcg
atcaccggtgcccgtggctccgtcgccgcgacggcaccgcgcatcaccgtcatcaacgtg
ccgaaggaaaagatccgcgaagtcatcggcaccggcggcaaggtgatccgcgagatcgtt
gaattctccggtgcgaagatcgatatcgaggatgatggaaccatcaagatcgcctcgacc
agcgaggaaagcacccagaaggcgattgatcgtattcagggcatcgtggccgaaccggaa
gtgggcaagatctacaacggcaaggtggtgaagaccgctgatttcggcgccttcgtcaat
ttcctcggctcccgcgacgggctggtgcatatcagcgagcttcagcagggccgggtcaac
aagacctccgacgtcatcaatgtcggtgatgtggtgaaggtgaaggttctcggctttgat
gatcgcggcaaggtgaaactgtccatgcggctggttgatcagaccacgggcgaggacatc
tctgacaaggtcggccccaagggtggcagaggcggtcgcggtgagggcgatctggccgag
taa
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integrated database retrieval system
