Granulibacter bethesdensis NIH3.1: GbCGDNIH3_2353
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Entry
GbCGDNIH3_2353 CDS
T03155
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gbc
Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:
gbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbc03016
]
GbCGDNIH3_2353
Enzymes [BR:
gbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GbCGDNIH3_2353
Transfer RNA biogenesis [BR:
gbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GbCGDNIH3_2353
Prokaryotic type
GbCGDNIH3_2353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHJ64261
UniProt:
A0AAN0RG33
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All DBs
Position
complement(2624547..2625470)
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AA seq
307 aa
AA seq
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MNRRRKGRPLDGWLIIDKPQGMTSTDVVNRVKRGFDARKAGHGGTLDPLATGLLPIAFGA
ATKTVPYVMDGTKLYHFTLKMGESRDTDDAEGAVTATSTVRPTDDVLRAALESFRGTIMQ
IPPAYSAIKVAGERAYDMARDGRPPDLPPRPARVDRFELIERLDDDLAVFEVQSGKGVYM
RSLARDIARACGTVGHIAALRRLRVGPFTEATAISLDKALASGDTPHASPDLLLPVATAL
ADIPALALTEQEATGLSHGQALSLIPLMGRIPDRIDPDGGLVRAMAGSRVVGLCRLQDGL
LRPERMM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacgcagaaaaggtcggcctctcgatggctggctgatcattgacaagccgcag
ggcatgaccagcaccgatgtggtgaacagggtcaagcgcggcttcgatgcccggaaagcg
gggcatggcggtacgctggacccgctggcgaccggtctgctgccgattgcgttcggggcg
gcgaccaagacggtgccttatgtgatggacggcacgaaactgtatcatttcactctgaaa
atgggcgagtcgcgcgatacggacgatgccgagggcgcagtaaccgccaccagcacggtg
cgtcccaccgacgatgtgctgcgggcggctctggagagttttcgcggtacgatcatgcag
attcctcccgcctattcggcgatcaaggtggcgggggagcgcgcgtatgatatggcgcgg
gatgggcgtccgcccgatctgccgccccgccccgctcgggtggaccggttcgaactgatc
gagcgtctggatgatgatctggcggtgttcgaggtccagtccggcaagggcgtctatatg
cgcagcctcgcccgcgatatcgcccgtgcctgcggaacggtgggccatatcgctgccctg
cgtcggctgcgggtcggcccctttacggaggcgacggctatttcgctggacaaggcgctg
gcttccggcgataccccccatgcttccccggaccttttgcttccggtcgcgaccgcgctg
gccgacatcccggcgctggccctgaccgagcaggaggccaccggcctttcccatggacag
gcactcagcctgattccgttgatgggccgtattccagaccggatcgatcccgatggtgga
ttggttcgcgccatggcggggagccgcgtcgttgggctgtgccgcttgcaggatggcctg
ttgcggcctgaacgcatgatgtga
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integrated database retrieval system