Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0052
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Entry
GbCGDNIH1_0052 CDS
T00392
Name
(GenBank) Succinyl-CoA synthetase beta chain
KO
K14067
malate-CoA ligase subunit beta [EC:
6.2.1.9
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe00630
Glyoxylate and dicarboxylate metabolism
gbe00680
Methane metabolism
gbe01100
Metabolic pathways
gbe01120
Microbial metabolism in diverse environments
gbe01200
Carbon metabolism
Module
gbe_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH1_0052
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH1_0052
Enzymes [BR:
gbe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
GbCGDNIH1_0052
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Ligase_CoA_2
DUF6758
Motif
Other DBs
NCBI-ProteinID:
ABI60950
UniProt:
Q0BW52
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All DBs
Position
55236..56405
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AA seq
389 aa
AA seq
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MDVHEYQAKELLASAGVAVPRGAIAFSADQAVYAATELGGWHWAVKAQIHAGARGKAGGI
KLCKTYHEVREAAAGMLGKRLVTHQTGPEGKPVQRVYVEVADPFEKEFYLGFVLDRKLER
VRVIASAEGGMEIEEIASKHPEKLIQVIVEPAVGLQQFQARQIAFKLGLSSRQVQRAVTS
IMGAYRAFRDHDATMLEINPLVLTKDDRILALDAKMSFDDNALFRRNNVANMHDPSQDDP
REAQAAEHNLNYVGLEGDIGCVVNGAGLAMATMDVIKYAGGEPANFLDVGGGASPERTAT
AFRLVLSDKNVKVVLVNIFAGINRCDWIAEGVVHAVKEVDLKLPLVVRLAGTNVEEGRRI
LKESGISVIMAESLTEAAEKAVEAAKAAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccatgagtaccaggcaaaagaattgcttgcgagcgccggtgtggccgtgccc
cgcggtgcaatcgctttcagcgctgatcaggccgtgtatgccgcgaccgaactgggtggc
tggcactgggcggtgaaagcccagattcatgccggtgcgcgcggcaaggccggcggcatc
aagctgtgcaagacgtatcatgaagtgcgcgaggctgctgccggtatgctcggcaagcgt
ctggtcacgcatcagaccggtccggaaggcaagcctgtccagcgcgtgtatgtcgaggtc
gccgatcccttcgagaaagaattctatctgggctttgtgctggatcgtaagctggagcgc
gtgcgtgtgatcgcctccgccgagggcggcatggagatcgaggaaatcgcttccaagcat
ccggaaaagctgatccaggtgatcgtggagccggcggttggtcttcagcagttccaggcc
cgccagatcgccttcaagctgggcctgtccagccgtcaggtacagcgtgcggtgaccagc
atcatgggcgcttatcgcgcattccgcgatcacgacgcgaccatgctggaaatcaatcct
ctggttctgaccaaggatgaccgtattctggcgctcgatgcgaagatgagcttcgacgac
aacgccttgttccgtcgcaacaacgtcgccaacatgcatgacccctctcaggacgatccg
cgtgaggcgcaggctgccgagcacaacctcaactatgtgggtctggaaggcgatatcggc
tgcgtggtgaatggcgccggcctggcgatggcgaccatggacgtcatcaaatatgcgggt
ggtgagcctgccaacttcctcgatgtcggcggcggggcaagccccgagcgtaccgcgacg
gcgttccgtctggtgctgtccgacaagaacgtgaaggttgttctggtcaacatcttcgcc
ggcatcaaccgctgcgactggatcgcggaaggcgtggtgcacgcggtgaaagaagtcgat
ctgaagcttccgctggtggtgcgtctggcaggcaccaatgtggaggaaggccgccgtatt
ctgaaagaaagcggcatttccgtcatcatggccgaaagcctgaccgaagcggccgaaaag
gccgtcgaggccgcgaaggccgcggcgtaa
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