Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0211
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Entry
GbCGDNIH1_0211 CDS
T00392
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbe03016
]
GbCGDNIH1_0211
Enzymes [BR:
gbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GbCGDNIH1_0211
Transfer RNA biogenesis [BR:
gbe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GbCGDNIH1_0211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABI61109
UniProt:
Q0BVP4
LinkDB
All DBs
Position
complement(243670..244959)
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AA seq
429 aa
AA seq
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MAACLPASQFHRIPAHQSRHWSFRPRTHGYKSSPMSRQSRSRFPSPTLITKSEDLAALCT
TLRREPYVTIDTEFMRERTYWPELCVVQLGGADCVAVIDTLAPELDLAPVGELLADPAVI
KVFHACRQDIEIFLLRFGSIPQPMFDTQVAAMVAGFGDQVGYDTLVSSLTGGHIDKAHRF
SDWSRRPLSQAQIDYAAADVTHLRGVYETLRDRLEKEGRLAWVSEEMAVLNDPATYRTDP
VTMWERLRPRTNNRRYLGLLRAICAWREVEAQRLNIPRQRLIKDESLLEIAATSPADAES
LAQARGVGRGFAEGRSGATLLAAIAEARGLPDADLPAIPRSRESGARPSPALVSLLKVLL
AAKSEQHNVAPKLLASSEDLDRLATEAEPDVPALTGWRRDVFGQDALALKNGEICLGVDG
KQIKLITTG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatgccttccagcctctcagttccatcgtattccggctcatcaatcacgccat
tggtccttccgcccccgcacacacgggtataaaagcagccctatgtcccgccagtcccgc
tccagatttcccagccccaccttgattacaaaaagcgaagacctcgcagcgttatgcacg
acgctgcgcagggagccatacgtcaccattgataccgagttcatgcgagaacgcacatac
tggccggaactttgcgtcgtgcagcttggcggggcggattgcgtcgccgtgatcgatacg
ctggcaccggaactggacctcgccccggtgggagaattgctggctgatccggcggtgatc
aaagtgtttcatgcctgccggcaggatattgaaattttcctgctgcgcttcggctccatc
ccgcaaccgatgttcgacacacaggtcgccgccatggtggcggggtttggcgatcaggtc
ggctatgacacgctcgtttcctccctgaccggaggacatatcgacaaggcacaccggttc
agtgactggtcccgccgtcccctgtctcaggcccagatcgactatgccgccgccgacgtc
acccatctgcgtggcgtgtatgagaccctccgtgaccggctggaaaaagaaggccgtctg
gcctgggtgtccgaggaaatggcggtgctgaacgatcccgcaacctatcgcaccgatccg
gtcacgatgtgggaaaggctgcgcccccgcaccaataaccggcgctatctggggttgctg
cgggctatctgtgcatggcgtgaggttgaggcacagcgcctgaacattccacggcagcgt
ctgatcaaggatgaaagcctgctggaaatcgccgcgacctcccctgccgatgcagagtct
ctggcgcaggcccgtggagtcgggcgcggctttgcggaaggccggtcaggcgccaccctg
ctggcggccattgccgaggccaggggcctgcccgacgctgatcttcccgcgattccacgc
agccgggagagtggggcgcgcccttctcccgctctcgtttcattgctgaaagtgctgctg
gcggccaaaagcgaacagcataacgtcgctccgaaactgctggcttcctcggaggatctg
gaccggctggcgaccgaggcggaaccagacgtgcccgctttgaccggatggaggcgggat
gtcttcggtcaggatgctctcgccctgaaaaatggggagatctgtcttggggtggatggg
aaacagatcaaactgatcaccacaggctga
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