Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0219
Help
Entry
GbCGDNIH1_0219 CDS
T00392
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GbCGDNIH1_0219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_0219
Enzymes [BR:
gbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GbCGDNIH1_0219
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GbCGDNIH1_0219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Surfac_D-trimer
EspA_EspE
NBAS_11th
TPR_16
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
ABI61117
UniProt:
Q0BVN5
LinkDB
All DBs
Position
255288..255554
Genome browser
AA seq
88 aa
AA seq
DB search
MSDAKSGPSSVSSAPIESLSFEDALAELEQIVRALEGGQQKLEHAIAAYERGNALRRHCE
TKLADVEARVAAIVESADGVTGTRPLSD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgaaaagcggaccgtcatctgtgtcttccgctcccatcgagtccttgtct
ttcgaggatgcgctggccgagctggagcagattgtgcgtgcccttgaaggcggccagcag
aaactggaacacgctattgccgcgtatgagcggggcaatgcactacgtcgccactgcgag
acgaagcttgcagatgtcgaggcgcgggtggcggcgattgtggaatcagcggatggcgtc
accggtacccgtcctctgagcgattga
DBGET
integrated database retrieval system
