Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0578
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Entry
GbCGDNIH1_0578 CDS
T00392
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GbCGDNIH1_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbe03021
]
GbCGDNIH1_0578
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_0578
Enzymes [BR:
gbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GbCGDNIH1_0578
Transcription machinery [BR:
gbe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GbCGDNIH1_0578
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GbCGDNIH1_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
ABI61476
UniProt:
Q0BUM6
LinkDB
All DBs
Position
652101..653120
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQRNWQSLIKPEKLDVEPGNEPSRIATIVAEPLERGFGMTLGNAIRRILLSSLQGAAV
TAVQIDGVLHEFSSVAGVREDVTDIVLNIKQLALRMHGEGPKRMMLTATGPGEVTAGQIQ
AGHDIEIMNPDLVLCTLDDGVKLGMEFTVNLGKGYVPASQNRQEDSPIGLIPIDAIYSPV
RRVSYKVEPTRVGQVTDYDKLLLTVETNGAVTPEDSVALAARILQDQLQLFINFEEPQQV
RHDEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRK
SLNEIKEVLANMGLSLGMSVSGWPPENIEDLAKRLEEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcatccagaggaactggcagtctctgatcaagccggaaaagctcgatgtggagccc
ggcaacgagccgtcgcgcattgcgaccattgtggcggagccgctggagcgcggcttcggc
atgacgctcggcaacgccatccgtcgtatattgctgtcatccctgcagggtgctgcggtg
acagcggtgcagatcgacggcgtgctgcatgaattctcgtctgtcgccggtgtgcgtgaa
gacgtgacggatatcgtcctgaacatcaagcagctggcccttcgcatgcatggcgaaggc
ccgaagcgcatgatgctgacggcaactggaccgggtgaagtcacggctggccagattcag
gccggtcatgacattgagatcatgaaccccgatctcgtcctctgcacgctggatgacggc
gtgaagctgggcatggagttcacggtcaatctcggcaagggctatgtccccgccagccag
aaccggcaggaagacagcccgatcggtctgatcccgatcgacgctatctattcccccgtt
cgccgcgtgtcctacaaggtggagccgacacgcgtcggtcaggtcaccgattatgacaag
ctgctgctgacggttgaaaccaatggtgcggtgactccggaagattcggtggctttggcc
gctcgtattcttcaggatcagcttcaactcttcatcaacttcgaagagccgcagcaggtc
cgccacgatgaaccgcaagacgatctgccgttcaaccgcaatcttctgcggaaggtggat
gagctggaactctcggttcgcagcgctaactgcctgaagaacgacaatatcgtctatatc
ggcgatctggtgcagaaatccgaacaggaaatgctgcgcaccccgaatttcgggcgcaag
tcgctgaacgagatcaaggaagtcctcgccaatatggggctttccctcggcatgagtgtg
tcgggctggccgccggaaaatattgaggacctggccaagcggttggaagaacccttctga
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