Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0869
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Entry
GbCGDNIH1_0869 CDS
T00392
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_0869
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GbCGDNIH1_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_10
AAA_30
TrwB_AAD_bind
T2SSE
AAA_16
DUF5852
AAA
DUF478
AAA_19
CbiA
Zeta_toxin
AAA_7
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ABI61767
UniProt:
Q0BTT5
LinkDB
All DBs
Position
999006..1000745
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AA seq
579 aa
AA seq
DB search
MTRRRCHPRIPTTGFLKRYGAGLMTETPILVGTGEHEARLLPAFANRHGLIAGATGTGKT
ITLQVLAESLSAAGVPVLCADVKGDLAGLSQPGAPNPKLEQRASRLGVHDYSYRAAPVVF
WDVFGVSGHKVRATVAEMGPILLSRMLELNDTQEGVLSIAFAVADDEGLLLLDYKDLRAV
LSHVAERAGELGTEYGNVSKATIGTIQRRLLRLEQEGGEAFFGEPALELADLLLITPDGR
GAVNILAADRLIHSPRLYATVLLWLLSTLYETLPEVGDLARPKLVFFFDEAHLLFDDAPK
ALVDKVTQVARLIRSKGVGVYFVTQNPLDIPASVLGQLGNRVQHALRAFTPADQKAVRAA
ADTFRQNPRLNTEEAIGSLAVGEALVSFLDESGSPSVVQKVQIVPPRSRIGAITAEERAE
IIRKSPVGTKYDASIDRISAYERLSGRATSSQQETAPVSPAPVEPGGDPWGTAMGPAPLP
PSSGQGSVWNSNGWQGGLADSAPYPPQEPVSRPAPREVRTPSRNGEGGGWLGDVLGSHGG
RQGLGEAFAKSVIRSLGSQVGTKVGGEVLRGILGSILKR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcgcaggtgtcatcctaggattccgacgaccggttttttaaaacggtacgga
gcaggactcatgacagaaacccccattctggtcggcactggtgagcatgaagcacgtctg
ctgcccgcttttgccaaccggcatggcctgattgcaggggcgaccggcaccggcaagaca
atcactcttcaggtgctggcggaatccctgtccgctgccggggtgccggtcttgtgtgcg
gatgtgaaaggtgatctcgcggggttgtcgcagccgggcgcccccaatccgaagctggaa
cagcgcgcgtcccggctgggcgttcatgattacagctatcgtgccgcgcctgtcgtattc
tgggacgtattcggggtttccggtcacaaggtgcgggccacagtggcggagatggggccg
atcctgctttcacgcatgctggagttgaatgacacacaggaaggtgttctctccatcgcc
tttgcggtagcggacgatgaaggcctcctgctgcttgattacaaggatttgcgggctgtt
ctctcgcacgtggccgagcgggccggggagctgggcacagaatacggcaatgtcagcaag
gccacgatcggtacgattcagcgccgcctgctgagactggaacaggaaggcggagaagcc
tttttcggtgaaccggcgctggaactggctgatttactgctgatcacgccggatggacga
ggagcagtgaacatcctggcggcggatcggctgattcacagcccgcgcctgtatgcgact
gtgctgctctggctgctgtccactttatacgagaccttgccggaagtgggtgatctggca
cgccccaaactggtgtttttcttcgatgaggcacatctgctgtttgatgatgcccccaag
gcgctggtggacaaggtgacgcaggttgcgcgtctgatccgttccaagggagtcggagtt
tatttcgtgacacaaaatccgctggatattcctgcctctgtgctgggacagctcggtaat
cgtgtgcagcatgcgctgcgcgcttttacaccagcggaccagaaagcagtccgcgcggcg
gcggacacgttccgccagaatccgaggctgaataccgaggaggcgatcggatcacttgca
gtcggtgaagcgctggtttctttccttgacgagagcggatcaccctctgtcgtgcagaag
gttcagatcgtgccgccccgctcccgtataggggcgattacggcggaggaacgggcagag
atcatccgcaaaagtccggtcggtacgaaatacgatgcatcgattgaccggatcagcgct
tatgagcgcctttccgggcgcgcgacttccagccagcaagagaccgcccctgtttctcct
gcgccggtcgagccgggcggtgacccttggggcacagcgatgggaccggcacctttgccg
ccatcatccggacaaggatcggtctggaacagcaatggttggcagggtgggctggccgat
tcagccccttatcctccgcaagagccggtttcccgccccgccccgcgtgaagtccggacc
ccgtcccggaacggggaaggcggcgggtggctcggcgatgtgctcggcagccatggtggg
cgtcaggggctgggtgaggcgtttgccaaatccgtcatccgcagcctgggcagtcaggtc
ggtaccaaggttggtggggaagttctgcgtggtattctcggatccatcctgaaacgctga
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