Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_1965
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Entry
GbCGDNIH1_1965 CDS
T00392
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe03030
DNA replication
gbe03410
Base excision repair
gbe03420
Nucleotide excision repair
gbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GbCGDNIH1_1965
03410 Base excision repair
GbCGDNIH1_1965
03420 Nucleotide excision repair
GbCGDNIH1_1965
03440 Homologous recombination
GbCGDNIH1_1965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbe03032
]
GbCGDNIH1_1965
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_1965
Enzymes [BR:
gbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GbCGDNIH1_1965
DNA replication proteins [BR:
gbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GbCGDNIH1_1965
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GbCGDNIH1_1965
NER (nucleotide excision repair)
GGR (global genome repair) factors
GbCGDNIH1_1965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Beta-prop_NOL10_N
DprA_N
HHH
Motif
Other DBs
NCBI-ProteinID:
ABI62863
UniProt:
Q0BQN9
LinkDB
All DBs
Position
2204999..2207800
Genome browser
AA seq
933 aa
AA seq
DB search
MSTSPTPDAALPDSTHLILIDGSGFIFRAFHALPPMTRPDGTPVNAVFGFTNMLARFLKD
HVGTHLAVIFDAGRTTFRNRLYPAYKAHRPEPPPELIPQFALIREATAAFGVPAIELADW
EADDLIASYARAAVTRGGRVTIVSSDKDLMQLIQPGVEMQDPIKQKTIGPAEVMEKFGVT
PEKMIDVQALMGDSVDNVPGVPGIGPKTAAQLINEYGDLDGVLAALETMKPSKRRDNLVA
HAEDARISRQLVALSQDAPLPVPITDLSVRQPDAAVLQDWLNAQGFRSTAARLGLETGGS
TSPASPAASRTAAAALAAASPLPPSSAPFGPYETVTTVEALEPWLTEARKAGLFAMDTET
DGLDAQQCRLVGISLAIAPGKACYIPLDHQTTLDQPVRQPAIAEIAAALNPILADPTVLK
IFQNGKFDLAVLRRHQMPVIAPIDDTMLISYAQEAGAHGHGMDELSVLHLGHSPISYDQV
TGTGRNRLPFPQVPIDKATAYAAEDADVTLRLWHALRPRLRETKSLTVYEQMERPLVPVL
CAMEAAGIRVDEAELRRMSADFALRMADMETEIHQLAGRPFNLASPKQLGEVLFDEIGLT
GSKRSKTGAWGTDAATLQAIADESGHALPARILDWRQLAKLKSTYADALVEDVNPRTGRV
HTSFQMAITTTGRLSSNEPNLQNIPIRTEEGSRIRRAFIADPGHVLISADYSQIELRLLA
HVADIPQLKDSFANGEDIHARTASEVFGVPMQGMDSLTRRRAKAINFGIIYGISAFGLAR
SLAISPGEARQYIDAYFARYPGIRDYMERTKEEARINGFVVTPFGRRCWVPGIADRNPAR
RGYAERQAINAPLQGGAADIIKRAMVRLPAVLADNSFQTRMLLQVHDELLFEAPEAEAEA
VARLVTTTMQDAARISVPLVVETGIGTNWGEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacctccccgacgccggacgcagcgcttccggacagcacccatctgattctgatc
gacggatcgggattcattttccgcgccttccacgccttgccgccgatgaccagaccggat
ggaacaccggtcaatgccgtcttcggctttaccaacatgctggcgcggtttctgaaagat
cacgtcggcacgcatctggcggtgattttcgatgccgggcggaccactttccgcaatcgg
ctctatccggcctacaaggcgcatcgtccggagccaccgccggagctgatcccgcaattc
gcgctgatacgggaggctacggccgccttcggcgtccctgcgatcgaactggccgactgg
gaagcggatgacctgatcgcctcctatgcccgtgctgcggtcacacggggcgggcgtgtc
accatcgtctcctccgacaaggatctgatgcagctgatccagccgggcgtggagatgcag
gatccgatcaaacaaaaaaccatcggccccgccgaggtgatggaaaaattcggcgtgacg
ccggagaaaatgatcgacgtgcaggcattgatgggggacagcgtcgataatgttccgggt
gttcccgggattggccccaaaaccgctgcccagctgatcaatgagtatggcgatctcgac
ggtgttctggctgcgctggagacaatgaagcccagcaaacgccgggacaatctcgttgcc
catgccgaggatgcgcggatttcccgtcaactggtggcactgagtcaggatgccccgcta
ccagtgccgatcaccgatctgagtgttcgtcagccggatgctgccgttctgcaggactgg
ctgaatgcgcaggggttccgcagcaccgcggcaaggctcgggcttgagacaggcggcagc
acttcccccgcctctcccgctgccagcagaactgcggctgccgcactggcagcagcctcc
cccctccccccttcctccgcgccgttcggcccttatgaaaccgtcacgaccgtcgaagcg
ctggagccatggctgacggaagcacggaaagccgggctgttcgccatggataccgaaacc
gacgggctggatgcacaacaatgcaggcttgttggcatttcgctcgccattgcgccggga
aaggcctgctatatcccgctcgatcaccagactacgctggatcagccggtgcgccagccg
gccattgcggagattgccgctgcgctcaacccgattctggccgatccgacagttctgaaa
atcttccagaacggcaagttcgatctggccgtgctgcgccgtcatcagatgccggtcatc
gccccgatcgacgacaccatgctgatttcctatgctcaggaagccggtgcgcacgggcat
ggcatggacgagctttccgtcctgcatctgggacacagcccgatttcctatgatcaggtg
accggcaccgggcgtaaccgtctgcccttcccgcaagttcccatcgacaaggccaccgcc
tatgccgccgaggatgccgatgtcacgctgcgtctgtggcatgcgctgcggccccgcctg
cgcgagactaaatccctgaccgtctatgagcagatggagcggccgttagtgccggtgctc
tgcgccatggaagcagccggcattcgggtcgatgaagccgaattacggcgtatgtcggca
gatttcgccctgcgcatggcagacatggaaacggaaattcatcagttggcaggccgcccg
ttcaacctcgccagcccgaaacagctgggagaggtgctgttcgacgaaatcggcctgacc
ggcagcaagcgatccaaaaccggcgcatggggcacggatgcggccacgttgcaggcgatt
gcggatgaaagcggtcatgccctgcctgcccgtatcttggactggcgccaactggccaaa
ctgaaatccacctatgccgatgcgctggtggaggatgtcaatccacggaccgggcgggtt
catacctcgttccagatggcgatcaccaccacggggcgtctgtcctccaacgagccgaat
ctgcaaaatatcccgatccgcacggaggaaggcagccgcatccggcgggctttcatcgcc
gatcccggccatgtgctgatcagcgccgattacagccagatcgaactgcgtctgctggcg
catgtcgccgatattccgcagttgaaggacagcttcgccaacggcgaggatattcatgcc
cgcaccgccagcgaagtgttcggcgtgccgatgcagggcatggattccctgacccgcaga
cgggcgaaggcgatcaatttcggcattatttacggcatcagcgcctttggtctggcacgg
tcgctggccatttctccgggcgaggcgcgtcagtatatcgatgcttatttcgcccgctat
cccggcatccgggactacatggaacggaccaaggaagaagcacgaatcaacggtttcgtg
gtcacacccttcggacgccgctgctgggtgccgggcattgccgaccgcaacccggcaagg
cgcggttatgcggaacggcaggcgatcaatgccccgcttcagggtggcgccgcggatatc
atcaaacgcgccatggtccggctgcctgccgtgctggctgacaacagttttcagacccgc
atgctgcttcaggtgcatgacgaattgctgttcgaggccccggaggccgaagccgaagct
gttgcccgtctggtcaccacgaccatgcaggatgctgcccggatttcagtgccgttggtg
gtggaaaccgggatcgggaccaactggggcgaggctcactga
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