Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26: HYW15_00610
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Entry
HYW15_00610 CDS
T10159
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbg Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26
Pathway
gbg03420
Nucleotide excision repair
gbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HYW15_00610
03430 Mismatch repair
HYW15_00610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbg03400
]
HYW15_00610
Enzymes [BR:
gbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HYW15_00610
DNA repair and recombination proteins [BR:
gbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HYW15_00610
MMR (mismatch excision repair)
Other MMR factors
HYW15_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQG42715
UniProt:
A0A7T5UNC6
LinkDB
All DBs
Position
complement(93302..95110)
Genome browser
AA seq
602 aa
AA seq
DB search
MAGELNPKQKEAVEATEGPVLVVAGAGAGKTKVIAERINHLIEKGVSPENILAVTFTNKA
AGEMRERTAISHKPYGVEHTAYSIPFIGTFHALGLLIIKENLARGFTILDEDDSLKLIRE
CLLELKVDPKQFDPSRIRGRVSLLKNHLVTAENFAEEGFFAEILGRAWRLYETKKGKQNQ
LDFDDLLLKPVLLFGREPEILKKYQNRWKYIHIDEYQDTNAAQYALSNLLAGERKNILAV
GDVDQAIYSWRGADFKNILNFQKDYPEAKIVFLEENYRSTDVILEAANAVISRNKFRIPK
NLWTNRAVEESSQIRLVFAEDEKREAEIVAAEINFLRKKIKLGEIAALYRTNAQSRALEE
VFLERNIPYKITGGVRFYERREIKDLISYLRLIRNPKDELSRKRIANVPPRKKKKIDFEK
LMENFRKEGEGLGAHGLLKKIIGEIGYRDYIDDGTEKGKERWQNIEELLGLAEKIEDADK
FLEHVSLFAVDDKYDPVEDKINLMTMHSAKGLEFEAVFVVGLEEGLFPHALSLEPEDLEE
ERRLCYVAITRAKTRLYLTSAARRTLFGERAANMPSRFLAEIPEHLLVYVNKPEENEEII
VE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagctaaatccgaagcaaaaagaggcggtggaggccactgaaggcccagtt
ttagttgtggccggagcgggagcgggaaaaaccaaggtcatagccgagagaattaaccat
ctcattgaaaaaggcgtcagtccggagaatattttggcggtgacattcacgaataaggcg
gcgggggagatgcgggagagaaccgccataagccataagccgtacggcgtagagcatacg
gcatacagtattcccttcatcggcactttccacgctctcgggcttttgataattaaagaa
aatttggcgagggggtttactattttagacgaagacgattcattaaaattaatcagagag
tgcctgttggagctcaaagttgacccaaagcaatttgacccgtcgcggataagggggcgc
gtttctcttttgaaaaatcatctggtcacggcggaaaatttcgccgaagagggctttttt
gcggagattctcggaagggcctggcggctttacgaaacaaagaaaggcaagcaaaaccag
ctagactttgacgacctgcttttaaaaccggttttgcttttcgggcgcgagccggagatt
ttaaaaaaataccaaaaccgctggaaatatatccatatagacgaatatcaagacaccaac
gcggcgcaatacgcgctttccaatctgctcgccggcgagcgcaaaaatatactggctgtt
ggcgacgttgaccaggcaatctacagctggcgcggggcggactttaaaaacattttaaat
ttccagaaagattatccggaggcgaaaattgtttttttggaagaaaactaccgctcaacg
gacgtaattttggaggcggcgaacgccgtcatatcccgcaacaagttcagaattcccaaa
aatctctggacaaatcgggcggtggaagagtcctcacaaatccgcctggtctttgccgag
gacgaaaagagggaagcggaaatcgtggccgcggaaatcaattttttgagaaaaaaaatc
aagcttggggaaattgccgcgctttaccgcaccaacgcccagtcgcgggcgttggaagag
gtttttttggagcggaacataccttacaaaatcaccggcggcgtcagattttacgaaagg
cgtgaaataaaagacctgatatcctacctgcggcttattagaaacccgaaagacgaatta
agccgcaaaagaatcgccaacgtcccgccgcgcaaaaaaaagaaaatagattttgagaaa
cttatggaaaatttccgcaaagaaggcgagggcttgggagcgcacgggcttttaaaaaaa
ataatcggggaaatagggtatagggattacattgacgacggcaccgaaaagggaaaagag
agatggcaaaacatagaagagcttttggggttagcagaaaaaatagaagacgcggacaaa
tttttggaacacgtttccctcttcgcggtagacgataaatatgacccagttgaggacaaa
attaatttaatgaccatgcattcggccaaagggctggaatttgaggccgttttcgtggtc
gggctggaagaggggctatttccacacgcgctttctttggagccggaggatttggaagaa
gagcgccggctctgctacgtggcgataacccgcgccaaaacccgcctctacctcacctcc
gccgcgcggcggacgcttttcggagaaagggcggccaatatgccctcgcggtttttggcg
gagataccggagcatttgctcgtttacgtaaataagccggaagaaaatgaggaaattatc
gtggagtaa
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