Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26: HYW15_00655
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Entry
HYW15_00655 CDS
T10159
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gbg Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26
Pathway
gbg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYW15_00655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbg03019
]
HYW15_00655
03016 Transfer RNA biogenesis [BR:
gbg03016
]
HYW15_00655
Enzymes [BR:
gbg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HYW15_00655
Messenger RNA biogenesis [BR:
gbg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HYW15_00655
Transfer RNA biogenesis [BR:
gbg03016
]
Prokaryotic type
tRNA degradation factors
HYW15_00655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
BPL_C
DegV
Motif
Other DBs
NCBI-ProteinID:
QQG42724
UniProt:
A0A7T5UMI8
LinkDB
All DBs
Position
complement(101642..103786)
Genome browser
AA seq
714 aa
AA seq
DB search
MQSKKFTTKVGGRTLTAEFSDLAHQANGSCLITYGGTVVLATAVQTKTAREGIDFFPLTV
DYEEKFYAAGMILGSRFMRREGRASDEAILVSRLIDRSIRPLFNQKTRNETQVIVLTLSI
DEDNDPDVLAILATSLALGTSNIPWAGPIGAIRIGKVGNEFVINPSYKMREGAELDAVIC
GVGGKVNPHTKTFGVGVNMIEAGAQEISEDEMMEALKLATAENDKLCEFQNKIIKEIGAA
KAEIALAEAPADMKAEFQKKIAPKLEETIYVKEKLNRYEAMNELKRQWMEECEENFADTP
RNIADSLFEDAINDIVHKNIIEKEKRPDGRGVKDLRPLFARAGVLPRTHGSGVFYRGETH
ILSVATLGAPSDVQLIEGMEVRTKKRFMHHYNFPPFSVGEIKPMRGPARRDIGHGALGEK
ALLAVIPPAEIFPYTIRVVSETLSSNGSSSMGSVTAGALALMDAGVPIKAPVSGIAVGLM
MQDKNNYKILTDIQGPEDHHGDMDFKVAGTRSGITAAQMDVKVDGIPLNIMGEAFLQARE
ARLQILDVIAKELPKHRDELSPYAPRILTMHINPEKIRDVIGPGGKIIQSIVAETGAEID
IEQDGTIFITSPNQESLKAAEEKITMLTKEFEVGETFTGKVTRIFPFGAMVEIGPKQEGL
VHISELTPFRVNQVTDVVAPGDEVKVKVVGIDDQGRVNLSIKAVQELQPKPRRK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaaaaaatttacgacgaaagtcggcggaaggactcttaccgccgagtttagc
gatttggcgcaccaagccaacgggtcttgcttaatcacttacggcggcacggttgttttg
gcgaccgccgttcagactaaaaccgcgcgcgagggaatagattttttcccgctgacggtt
gattacgaagaaaaattttacgccgcggggatgattttgggctcgcgtttcatgcgccga
gaagggagagcgtcagacgaagcaatattggtttcgcgcctgattgaccgaagcataagg
ccgctttttaaccaaaaaacaagaaacgaaacgcaggtgattgtgcttacactctcaatt
gacgaggacaacgacccggacgtgcttgcgattttggcgacttctctggcgctggggact
tccaacatcccctgggccggtccgattggcgcaataagaattggcaaagtaggaaatgag
tttgtgataaatccaagctacaaaatgcgtgagggtgccgagttagacgcggtgatttgc
ggtgtgggaggcaaggtaaacccccacaccaaaacctttggtgtgggggtaaatatgatt
gaagccggcgcgcaagaaatctcggaagacgaaatgatggaggctctcaaactcgcaacg
gcggaaaacgacaaactttgcgaattccagaataaaatcataaaagagatcggcgcggcg
aaagcggaaattgcgctggccgaggcgcctgccgacatgaaagccgaatttcagaaaaaa
atcgcgccgaagctggaagagacaatttacgtaaaagaaaaattaaaccgctacgaagcg
atgaacgaattaaaaaggcaatggatggaagaatgcgaagaaaatttcgcggacactccg
cgcaatatcgccgattccctttttgaagatgcgattaacgacattgtccataaaaatatc
atagaaaaagaaaaaaggcccgacggcaggggggtaaaagatttgcgcccgcttttcgca
agggcgggagtgctcccaaggacgcacggctccggtgttttttacaggggtgagacgcac
attctttccgtggcaaccctgggcgcgccgtcggacgtccagctgattgaaggaatggaa
gtgcggacgaaaaaaagatttatgcaccattacaatttcccgccgttctcggtcggggag
ataaaaccgatgaggggccctgctcggcgcgacatcggccacggagctctgggggaaaaa
gcgctactggccgtaattcctccggcggaaatttttccttacaccatccgcgtggtctcc
gagacgctttcgtccaacggttcctcctcaatgggctcggtaacggccggcgcattggcg
ctgatggacgcgggagttcccataaaagcgccggtttcggggattgcagtggggctgatg
atgcaagataaaaataattacaaaattttaaccgatatccaggggccggaagaccatcac
ggcgatatggattttaaagttgccgggacacgcagtggaatcaccgcggcccaaatggac
gtgaaagtggacggaataccgttaaacattatgggggaggcgtttttgcaggcgcgcgag
gcgcgtctccagattttggacgtcatcgccaaggaacttcccaaacaccgcgacgaactt
tcaccttacgctccgcggattttaaccatgcatataaatccggagaaaatccgcgacgtc
atcggcccgggaggcaaaataatccaatcaatcgtggcggaaaccggcgcggagattgat
attgagcaggacggcacgattttcatcacctcgccgaatcaagaaagcttaaaagcggcc
gaagaaaaaatcacaatgctgacaaaagaatttgaggtcggagaaacgtttacaggcaaa
gtcacgcgcatcttcccattcggcgcaatggtagaaatcgggccgaaacaggaaggattg
gtacatatctccgagctcacgccttttcgggtaaatcaggtcacggacgtagtcgcgccg
ggggacgaagtaaaagtaaaagtcgtcggcattgacgaccaaggaagggtaaatctttca
atcaaagccgtgcaggagcttcagccgaagccgcgcagaaaataa
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