Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26: HYW15_03665
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Entry
HYW15_03665 CDS
T10159
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gbg Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26
Brite
KEGG Orthology (KO) [BR:
gbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbg03032
]
HYW15_03665 (topA)
03400 DNA repair and recombination proteins [BR:
gbg03400
]
HYW15_03665 (topA)
Enzymes [BR:
gbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYW15_03665 (topA)
DNA replication proteins [BR:
gbg03032
]
Prokaryotic type
DNA Topoisomerases
HYW15_03665 (topA)
DNA repair and recombination proteins [BR:
gbg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYW15_03665 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_InsA
Toprim_2
Zn_ribbon_3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
QQG42570
UniProt:
A0A7T5RES3
LinkDB
All DBs
Position
616986..618995
Genome browser
AA seq
669 aa
AA seq
DB search
MKLVIVESPTKAKTISQFLGKDSATAGEFVIESSYGHVRDLPKSQLGVDVENNFQPKYIV
PLKARKNVSALKKKAAKAEKIILATDEDREGEAIAWHLLSALGLEDRPEDNILRIVFHEI
TKKAIEKALKNPRDIDMHMVNAQQARRILDRLVGYKLSPFLWQKVARGLSAGRVQSVAVR
LIVEREAEIDAFKKEEYWTIEGIFSAKGGSASSGKKDDNSFKGELYKIGEKVLEKFDIKN
ETEAKKILDKLEGKNAEVISVEKSAEERHVPPPFTTSTLQQAAFQRLRMSAKETMRNAQR
LYEEGYITYMRTDSLNLSQESLSEAAGWIKENLGGKYLLPKPRIFKTKSKSAQEAHEAIR
PTDPSRRPEDLKKSTDPREARLYELIWRRFISSQLPSAVLENTKADIDIDGHTFRANGTR
LVFDGFLKIYQMKFSENILPELREKEGLKTESIAPIQHFTEPPPRFNEASLVKALEKNGI
GRPSTYAPTIATIQDRGYVEKDEQRRLRPTETGKIVNAMLVENFPEIVDISFTAKMEEGL
DEIAEGRREWPPVIREFYEPFSKHLETKYESVDSQKIEEKTDESCPNCGKPIVIKRGRFG
RFMACSGFPECKTTKKLPEPALNIKCPKCLEGDVVRRRGKKNGRYFFGCSRWPACDFVSW
TLPGREKKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtaattgttgaatcgccaactaaagcaaagacgatttcccaatttcttggg
aaagattccgccacggcgggcgagtttgttattgaatcaagctacgggcatgtgcgcgat
ctgccgaagtcgcagctcggagtggacgtggaaaataatttccagccgaaatacattgtc
cccttaaaagccagaaaaaacgtaagcgctttaaagaaaaaagcggctaaagccgaaaaa
ataattctggcgacggatgaagatcgcgaaggcgaagccatcgcctggcatctgctctcc
gccttggggctggaagaccgccccgaggataacattctgcggatagtttttcatgaaata
actaaaaaggcgatagaaaaagcgctgaaaaatccgcgcgatatagacatgcacatggtc
aacgcccagcaggcgcggaggatcttggaccggctggtgggctacaagctttctccgttt
ttgtggcaaaaagtggcccgggggctttcagcggggagagtgcagtccgttgccgtgcgg
ctgatagttgagcgcgaagcagagattgatgcgtttaaaaaagaagaatattggacgatt
gaaggaattttttccgccaaaggcggatccgcctccagcggaaaaaaagacgacaattct
tttaagggtgaactttataagattggcgagaaagtgctggaaaaatttgacataaaaaac
gaaactgaagccaaaaaaatcttggataagttggagggaaaaaatgccgaagttatttcc
gtggaaaaaagcgcggaagagcgccacgtcccgccgccctttaccacctcaactctgcag
caggcggcttttcaacggctccgaatgtccgccaaagaaaccatgcgcaacgcccagcgc
ctctacgaggagggctacataacttacatgcgcacggattcgctgaatctttcgcaggaa
tcgctctctgaagccgccggctggattaaagaaaacctcggcggcaaatatttattaccg
aagccgaggatttttaaaaccaaatcaaaatccgcccaggaagcgcacgaagccatccgc
cccacggacccttcccgcaggccggaagatttaaaaaaatccaccgacccgagagaagca
aggttatacgagcttatctggcggagattcatttcctcacagctccccagcgcagttttg
gaaaacacgaaagcagatattgatattgacggccatactttccgcgcaaacggcacgcgg
cttgtctttgacggatttttaaaaatttatcagatgaagttttcggaaaatatccttccg
gagcttagagaaaaagaaggattgaaaactgaatcaatcgcgccgattcagcactttacc
gagccgccgcccagattcaacgaagcgagcttggtaaaagcattggagaaaaacggcata
ggccgaccatcaacctacgcgccgaccatagccacaatccaagaccgcggatacgtggaa
aaggacgagcaaaggcggctccgcccgaccgaaaccgggaaaattgtaaacgcgatgctg
gtggaaaactttccggaaatagtggacatcagctttacggcaaaaatggaagaggggctg
gacgagattgcggaagggcgcagagaatggccaccggtcatccgcgaattttacgagccg
ttttcaaaacaccttgaaacaaaatatgaaagcgtggattcccaaaaaattgaggaaaaa
actgacgagagctgcccgaattgcggcaaaccaatagtcataaaacgcggaaggtttgga
agattcatggcctgctccggcttcccggaatgcaaaacgacaaaaaaactaccggagccg
gccctcaatataaaatgtccgaagtgtcttgagggcgacgtcgtccgccgccgcggcaaa
aaaaacgggcgctatttcttcggctgctctaggtggcccgcctgcgacttcgtttcctgg
acactacccggcagggaaaagaaagagtaa
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