Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0080
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Entry
GbCGDNIH2_0080 CDS
T03083
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00260
Glycine, serine and threonine metabolism
gbh01100
Metabolic pathways
Module
gbh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GbCGDNIH2_0080
Enzymes [BR:
gbh01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
GbCGDNIH2_0080
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
GbCGDNIH2_0080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_3
NAD_binding_8
GIDA
Thi4
FAD_binding_3
DAO
AlaDh_PNT_C
Fer2_BFD
Pyr_redox
XdhC_C
VanY
Motif
Other DBs
NCBI-ProteinID:
AHJ67061
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All DBs
Position
complement(88187..91174)
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AA seq
995 aa
AA seq
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MTSPSIHSAPFRLPQGGRIRRDKPLSFTFDGKTYQGAQGDTLASALLAHGVHLMGRSFKY
HRPRGVLSAGADEPNALVGVGAEQSRYTPNLRATQVELYDGLVAESQNRSPSLSFDIGAI
NNALGPFFPAGFYYKTFKWPRKAWDRLYEPVIRRAAGLGKAPTAPDADHYAQRYAHCDVL
IVGAGPAGLAAALAAADAGARVILCDEQSEMGGSLLAPNGAQIDGKPAELWLSDTLAQLA
ADPRVTLLSRTTAFGYYAHNFVGLAQRITDHLPAILPNTPRERMWHVRAGQVVLATGSLE
RPLVFPENDRPGIMLADSARIYAQRYGVKPGTKAVIATANDEAYSTAVALAKAGVEIAAI
ADLREQADGERIAAARAARLPIRMGSAVIGTGGHLRVSSARIGGKQGRDEHIRCDLVLMC
GGFTPTVHLFSQSRGQLVYDAERQIYVPGAHAENERSAGACAGHFGLAVALEDGYSAGLD
AAKGGNSRIFQVSAPAAGTGGFIGEVPHNRRSPYAKAFVDFQNDATAKDIKLAVREGFRS
IEHVKRYTTTGMATDQGKTSNMNALGIVSGALDTPVPQIGLTTFRPPYTPVTFGAFAGTA
RGDLFDPLRKTPIHGWAEEHGAVFEDVGIWKRARYFPQDGEDMDAAVLRECARARAAAGI
FDASTLGKIEVVGPDAAEFLNRLYVNAWDKLKPGKCRYGLLLREDGFITDDGVIGRIAQD
RFHVTTTTSGAPRVLAMMEDYRQTEWPELNVWLTSTTEQWAVIAVQGPKARDIIAPLIEG
VDLNDFAHMSVADATIAGVPGRLFRVSFTGELGYELNVPADYGRAIWEAVYERGQDFGIV
PYGTETMHVLRAEKGYVIVGQETDGTATPDDVGLAWAIGKAKKDFVGKRSLERTSMKDPN
RKQLVGLLTDDPAIVLEEGAQIVADPAHPLPMPMIGHVTSAYRSATLGRSIALAMIKGGR
SRIGQTVYIPMPGRTIAAKVTEFVFYDPEGVRLNG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccccagcattcattccgcgcccttccgtctgccgcagggcggccgcatccgg
cgcgacaaaccgctgtccttcacgtttgacggcaagacctatcagggtgcgcagggcgat
acgctcgcctccgcgctgctcgcccatggcgtgcatctgatgggccggtcgttcaaatat
caccgtccgcgcggtgtgctgagcgccggagccgatgagccgaatgcgctggtgggcgtg
ggcgccgagcagagccgctacacccccaatctgcgcgcgacgcaggtggagctgtatgat
ggtctcgtcgcggaaagccagaatcgcagcccgtctttgtctttcgatatcggcgcgatc
aacaacgcgctggggccgttcttccctgccgggttctactacaagaccttcaaatggccg
cgcaaagcctgggacaggctctatgagccggtgatccgtcgcgccgccggtctgggcaaa
gccccgaccgccccggatgccgatcactacgcccagcgttacgcgcattgcgacgtgctg
atcgtcggtgccggacctgccggtctcgccgccgctctggctgcggccgatgccggcgcc
agggtgatcctgtgcgacgaacagtcggaaatgggtggctccctgctggcaccgaacggt
gcgcagatcgacggcaagcctgccgagctgtggctgtcggacacgctggcgcagcttgcg
gccgacccgcgcgtgaccctgctgtcccgcaccacggcgttcggttactatgcccataat
ttcgtgggtctggcacagcgcatcaccgatcatctgcctgccatccttcccaacaccccg
cgtgagcggatgtggcatgtccgcgccggacaggtggttcttgccaccggctccctcgaa
cgaccgctggtgtttccggaaaatgaccgtcccggcatcatgctggccgattccgcccgt
atttatgcccagcgttatggcgtgaaaccgggcaccaaagcggtgatcgccaccgccaat
gacgaagcctacagcacggcagtcgcgcttgcgaaagcgggcgtcgagattgccgccatc
gccgatctacgtgaacaggcagacggagagcgcattgccgcggctcgtgctgcccgtctt
ccgatccggatgggatcggccgtgatcggcaccggcggtcatctgcgcgtgtcctccgcc
cgaattggcggcaaacagggacgtgatgaacatatccgctgcgatctggtgctgatgtgt
ggcgggtttacccccaccgtgcatctgttcagccagtcccgtggccaactggtctatgat
gcggaacgtcagatttacgtgcccggcgcacacgcggaaaatgaacgctctgccggtgcc
tgtgcgggtcatttcggcctcgctgtagcgctggaagacggatattccgccggtctggac
gctgcgaaaggcggcaacagccgcattttccaggtcagtgcccccgcagccggcacgggc
ggcttcatcggcgaggtgccgcataaccgccgctccccctatgccaaggctttcgtggat
ttccagaacgatgcaaccgccaaggacatcaaactggccgtgcgggagggcttccgctcc
atcgagcatgtgaagcgctacaccaccaccggcatggccaccgatcaggggaagacctcc
aacatgaacgcgctgggcatcgtgtccggtgcgctggatacgccagtgccgcagatcggc
ctgaccacgttccgtccgccctatacgcccgttacgttcggcgcgtttgcgggcacagcg
cggggcgacctgttcgatccgctgcgcaagacgccgattcatggttgggccgaagaacat
ggcgcggtgttcgaggatgtcggcatctggaaacgggcccgctacttcccccaggacggc
gaggatatggatgcggcggtgctgcgcgaatgcgcccgggcccgtgccgcagccggtatt
ttcgatgcctccacgcttggcaagatcgaagtggtcggaccggatgcggcagagttcctc
aaccgtctgtatgtcaatgcgtgggacaagctgaaacccggcaaatgccgttatggcctg
ctgctgcgtgaagacgggttcatcactgatgacggcgtgatcgggcgcattgcgcaggat
cgtttccacgtcaccaccaccaccagcggcgccccgcgcgtgctggcgatgatggaggat
taccggcagaccgagtggcctgaactgaatgtctggctgacctccaccaccgaacaatgg
gcggtgatcgcagtgcagggcccgaaggcccgcgacatcatcgcgccgctgatcgagggt
gtggatctgaacgactttgcgcatatgagcgtcgccgacgccaccattgccggggtgcct
ggccgtctgttccgcgtcagcttcaccggtgagctgggctacgaactgaacgtcccggcg
gattacggccgtgcgatctgggaagcagtatatgagcgtggtcaggacttcggcatcgtg
ccgtacggcacggaaacaatgcatgtgctgcgtgccgaaaaaggctatgtgattgtcggt
caggaaaccgatggtactgccacaccggatgatgtcgggctggcctgggccattggcaag
gcgaagaaggatttcgtcggcaaacgctcgcttgagcgcacgtcgatgaaagacccgaat
cgcaagcagcttgtcgggctgttgacggatgatccggctatcgtgctggaagaaggcgcg
cagatcgtagccgatccggcgcatccgctgccgatgcccatgatcgggcacgtcaccagc
gcttatcgcagcgccacgttgggccgctccatcgcgctggcgatgatcaagggcggacgg
tccagaatcgggcagaccgtgtatattccgatgcccggtcgaaccatcgccgcgaaagtc
accgagtttgtgttctatgatccggaaggagtacggctcaatggctga
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