Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0129
Help
Entry
GbCGDNIH2_0129 CDS
T03083
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00300
Lysine biosynthesis
gbh00470
D-Amino acid metabolism
gbh01100
Metabolic pathways
gbh01110
Biosynthesis of secondary metabolites
gbh01120
Microbial metabolism in diverse environments
gbh01230
Biosynthesis of amino acids
Module
gbh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GbCGDNIH2_0129
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GbCGDNIH2_0129
Enzymes [BR:
gbh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GbCGDNIH2_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AHJ67117
LinkDB
All DBs
Position
144997..146343
Genome browser
AA seq
448 aa
AA seq
DB search
MMDMHVTDTDRPDPSVMELIAARPSLSMHAMDGLLLDDVPLNAIADAQGTPCWVYSAGTF
RRRYRLLRDALAEAGIAPHIHFAVKANDHLAVLRLLGNEGAGADVVSGGELSRARAAGIP
GERIVFSGVGKTAAELTLALSEGIAQINVESAEELEMLSAIACGMGRTARIALRVNPDVD
AGTHPKITTGLADNKFGIQAGDVPALYARAASLPGIEPVGLAMHIGSQINVMTPFLAAFR
RMAILVQALRDQGLTVRLVDCGGGLGIDYRGDVTSTPAALAGAMKAELGGLDVQLVLEPG
RWLAGPAGVLLSSVVLVKQSRPRPFVVLDAAMNDLLRPSLYEAWHGIVPLSAVEAAHMPI
DCDVVGPVCETGDTFARSRSLPPLQGGSRVAILEAGAYGAVMSSTYNARPLAAQVLVDDG
HWAVIRPRQTVDALWRDEVIPPHLTRQG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacatgcatgtgacggatacggaccgaccggacccttcggtgatggaactcatt
gccgcacgcccgagcctttccatgcatgcgatggatggattgctgctggatgatgtgccg
ctgaatgccattgccgatgctcagggcacgccgtgctgggtctactcggcggggacgttc
cgccggcgttaccggctgttgcgtgatgcgctggcggaggcagggatcgcgccgcatatc
catttcgccgtgaaggccaatgaccatcttgccgtgctgcgtctgctcggcaatgagggg
gcgggcgcggatgtggtcagtggcggcgaactcagccgtgcgcgggccgctggcattccg
ggggagcggatcgtgttctccggtgttggcaagaccgcggcagagctgacactggctctg
tccgaagggatcgcccagatcaatgtggagagcgcggaggagctggagatgctctccgcc
attgcctgcggtatgggccgcacggcgcggatcgcgctgcgggtcaatccggatgtggat
gccggtacgcaccccaagattacgacaggtctggccgataacaaattcggcattcaggcc
ggggatgtgcctgccctgtatgcgcgggctgcgtccctgcctgggatcgaaccggtcggc
ctcgctatgcatatcggcagccagatcaatgtcatgacccccttcctggccgcattccgc
cgtatggcgattctggtgcaggcgctgcgggatcagggattgacagtcaggctggtggat
tgtgggggtggtctggggatcgattatcgcggcgatgtcacctccaccccggcggcgctg
gctggggcgatgaaggcagagctgggcggtctggacgtgcagctggtgctggagccgggg
cgctggctggccggtcctgccggtgtgctgctgtccagcgtcgtcctggtgaagcagtcc
cgtccgcgtcctttcgtggtgctggatgcggcgatgaacgatctgctgcggccctccctg
tatgaggcatggcacggaatcgtgcccttatccgcggttgaggccgcgcatatgccgatc
gactgcgatgtggtgggtccggtctgtgaaaccggtgatacctttgcgcggtcgcggtcg
ctgccgccgcttcagggcggcagccgggtcgcaattctggaggcgggggcttacggtgcg
gtgatgagctccacatataatgccagaccactggcggctcaggtgctggttgatgatggg
cactgggcggtgatccgcccgcgtcagacggtcgatgcgttgtggcgtgatgaggtgatt
ccaccgcatctcacccggcagggctga
DBGET
integrated database retrieval system