Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0207
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Entry
GbCGDNIH2_0207 CDS
T03083
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh03420
Nucleotide excision repair
gbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GbCGDNIH2_0207
03430 Mismatch repair
GbCGDNIH2_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbh03400
]
GbCGDNIH2_0207
Enzymes [BR:
gbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GbCGDNIH2_0207
DNA repair and recombination proteins [BR:
gbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GbCGDNIH2_0207
MMR (mismatch excision repair)
Other MMR factors
GbCGDNIH2_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_22
DUF3553
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHJ67198
LinkDB
All DBs
Position
238895..241174
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AA seq
759 aa
AA seq
DB search
MTDHPSSPFPPAAASVPSEGGEAYLARLNPEQRAAVETIDGPLLVLAGAGTGKTRVLTTR
FAHILKSGRAFPNQVLAVTFTNKAAREMRERVGAILGEKVEGLWLGTFHALCARMLRRHA
EYVGLSSNFSILDSDDQMRLLKQVAETFRVDTKRWPLPGLMAAIQRWKDRGLTPERVTPA
EDTDYASGHAVAIYRAYQERLRALNAADFGDLLLFMTEILRSRPEVLSQYHRAFRYILVD
EYQDTNLVQYLWLRLLAQGRQNGDQNICCVGDDDQSIYSWRGAEVENILRFEKDFPGAHV
VRLESNYRSTAPILGAAAGLIAHNEGRLGKTLRPGRANAEGEKVDVISLWDSDEEARMVG
DRIETARRNRHPLSEIAVLVRAGFQTRSFEERLITLGVPYRVIGGLRFYERAEIRDAIAY
ARLLAQPSDDLAFERIVNVPRRGVGEVALRGLHERARADSVPLLEAASRQLADGKLRGKV
KEGIAAFLQGLESWRRMLGSEGHVATMATMLDESGYTEMWKQDKSPEAPGRLENLKELLR
AMAEFDALPGFLDHVSLVMENEQDAGDDKVSLMSLHAAKGLEFDMVFLPGWEEGLFPHQR
ALDEGGLKSLEEERRLAYVGLTRARQKAVISHAANRRIYANWQSAIPSRFIEELPPDCIQ
SQGSAVMEREQRLRGGFGGGVQFPLLATRTAPRAAAPRVREAWEQPGRASQAGRFSVGSR
VFHDKFGYGTVTAVIDDRLDVTFDKAGTKRILDSFVEPR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcatccttcatcgccgtttcctcctgctgctgcgtctgtcccgtctgagggg
ggggaggcatatctggcgcgcctgaaccccgaacagcgggcggcggtggagacgattgat
gggccgctgctggtgctggccggggcgggcacgggcaagacacgggtgctgaccacccgc
tttgcccatattctgaaaagcgggcgtgcttttcccaatcaggttctggccgtcaccttc
accaacaaggctgcccgggaaatgcgggagagggtcggggcgatcctcggcgagaaggtg
gaggggctgtggctcggcacattccatgcgctctgcgcccgtatgctgcggcggcatgcg
gagtatgtcggcctctcctcgaatttctcgattctcgacagtgatgaccagatgcgcctg
cttaagcaggtggcggagacgtttcgggtcgataccaaacgatggccgctgcccggcctg
atggccgccatccagcgctggaaagatcgtggcctgacgcccgagcgtgtgaccccggct
gaggatacggattatgcctccggccatgctgtcgcgatctatcgggcctatcaggagcga
ctgcgggcactcaatgcggctgatttcggtgatctgctgcttttcatgacggaaattctc
cgctcccggccggaagtgctgagccagtatcatcgggctttccgttacattctggtcgat
gagtatcaggatacgaatctggtccagtatctctggctgcgtctgctggcgcagggaagg
cagaacggggaccagaacatctgctgcgtcggggatgacgatcagagcatctattcctgg
cgcggggcggaggtggaaaacatcctacgcttcgaaaaggatttccccggcgcgcatgtg
gtgcggctggagagtaattatcgctcgaccgcccccattcttggcgctgcggccgggctg
attgcgcataatgaagggcggctcggcaaaacgctgcgtcctggccgggccaatgcggaa
ggtgagaaggtcgatgtcatctctctgtgggattccgatgaggaagcccgcatggtgggg
gatcgcatcgaaacggcgcgtcgtaaccgtcacccgttatcggagatcgcggtgctggtc
agggccggctttcagacccgctccttcgaggaaaggctgattaccctgggcgtgccctat
cgtgtcattggtgggttgaggttctatgagcgggccgaaattcgcgatgcgatcgcttat
gcgcggttattggcccaaccttccgatgatctggcgttcgagcggatcgtgaatgtgccg
cgtcgtggcgtgggagaggtcgcgttgcgtggcctgcatgaacgggccagggctgattct
gtcccgctgctggaagccgcttcacggcaactggccgatggtaaattgcgcgggaaagtg
aaagagggcatcgctgccttcctgcagggtctggagagttggcggcgcatgctgggcagc
gaaggccatgtcgccaccatggccaccatgctggatgagagcggctacacggagatgtgg
aagcaggataaatcacccgaggcgccgggccggctggaaaatctcaaggaattgctgcgg
gccatggccgagttcgatgctctgcccggttttctcgatcacgtctcgctggtgatggag
aatgaacaggatgcgggcgacgacaaggtcagtctgatgagcctgcacgccgccaaggga
ctggaattcgacatggttttcctgccgggttgggaggaaggcctgtttccccatcaacgg
gcgctggatgaaggcggcctgaaaagcctggaggaggagcggcggctggcctatgtgggc
ctcacgcgcgcgcgacaaaaagccgtgatcagccatgccgccaaccggcgcatttacgcc
aactggcagagcgccattcccagccgctttatcgaggaactgccgccggactgcatccag
tcgcaggggtcggcagtgatggagcgggagcagcggttgcggggtggattcggcggtggc
gttcagttcccgctgctggcgacccgtactgcaccccgggcggcagcaccacgggtgcgg
gaagcatgggaacagccgggccgggcatctcaggcagggcggttttcggtcggcagccgg
gtttttcatgacaaattcggctatggaacggtgacggcggtgattgatgaccgtctggac
gtgacattcgacaaggcaggcacgaaacgcattctcgacagtttcgtggaaccgcgatga
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