KEGG   Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0701
Entry
GbCGDNIH2_0701    CDS       T03083                                 
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
gbh  Granulibacter bethesdensis CGDNIH2
Brite
KEGG Orthology (KO) [BR:gbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gbh03016]
    GbCGDNIH2_0701
Enzymes [BR:gbh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     GbCGDNIH2_0701
Transfer RNA biogenesis [BR:gbh03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    GbCGDNIH2_0701
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AHJ67739
LinkDB
Position
complement(791789..792568)
AA seq 259 aa
MPDATFSVVVFSVRLFLSVWQDNPNAACLDFIPHLSSFVSLSPVITQFMADKTIHLHRHD
LPPSLDIGPIIAIDTETMGLNHHRDRLCLIQISAGDGHAHLVQIVPERLGGKGADCPNLK
RLLSNPGCVKLMHYARFDVGILQNALGIAMSNVKCTKIAAKLVRTFTDRHGLKDLCRDLL
GVEISKQQQSSDWGAPELTPEQMAYAASDVLYLHALWNRLEGLLIREDRLALAEACFAFL
PARARLDYLGYDEPDIFSH
NT seq 780 nt   +upstreamnt  +downstreamnt
ttgcccgatgcaacgttttccgttgtcgtcttttcagttcgtttattcttatctgtctgg
caggataaccccaatgcagcatgcttggattttatcccccatctttcatctttcgtaagt
ctcagcccggtgatcacacagttcatggccgataaaaccattcatctccatcggcacgac
cttcccccttcattggatatcggccccattatcgccattgatactgaaacgatggggctg
aatcatcaccgggaccggctgtgcctgatccagatttccgccggagatggtcatgcacac
cttgtgcagattgtgccggagcgattgggcggcaaaggcgccgattgccccaatctcaaa
cggttgctcagcaatcctggctgcgtaaagctgatgcattacgcacggttcgatgtcggc
attttgcagaacgcactgggcatcgcgatgtccaacgtcaaatgtaccaagatcgccgcc
aagctggtccgtacctttacagatcgccatggcctgaaagatctgtgccgcgatcttctg
ggggtagagatcagcaagcagcagcagagctccgattggggcgcacctgaactgacgcca
gagcagatggcctatgccgcctccgatgttctgtatctgcatgcactatggaaccggctg
gaaggattactgatccgggaggacaggcttgctctggctgaagcatgttttgcctttctg
cctgccagagcacggctggactatctgggttatgatgagccggatattttttcacactga

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