Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0869
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Entry
GbCGDNIH2_0869 CDS
T03083
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbh03400
]
GbCGDNIH2_0869
DNA repair and recombination proteins [BR:
gbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GbCGDNIH2_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_10
AAA_30
TrwB_AAD_bind
T2SSE
DUF5852
AAA_16
AAA
DUF478
AAA_19
CbiA
Zeta_toxin
AAA_7
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AHJ69409
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Position
998872..1000611
Genome browser
AA seq
579 aa
AA seq
DB search
MTRRRCHPRIPTTGFLKRYGAGLMTETPILVGTGEHEARLLPAFANRHGLIAGATGTGKT
ITLQVLAESLSAAGVPVLCADVKGDLAGLSQPGAPNPKLEQRASRLGVHDYSYRAAPVVF
WDVFGVSGHKVRATVAEMGPILLSRMLELNDTQEGVLSIAFAVADDEGLLLLDYKDLRAV
LSHVAERAGELGTEYGNVSKATIGTIQRRLLRLEQEGGEAFFGEPALELADLLLITPDGR
GAVNILAADRLIHSPRLYATVLLWLLSTLYETLPEVGDLERPKLVFFFDEAHLLFDDAPK
ALVDKVTQVARLIRSKGVGVYFVTQNPLDIPASVLGQLGNRVQHALRAFTPADQKAVRAA
ADTFRQNPRLNTEEAIGSLAVGEALVSFLDESGSPSVVQKVQIVPPRSRIGAITAEERAE
IIRKSPVGTKYDASIDRISAYERLSGRATSSQQETAPVSPAPVEPGGDPWGTAMGPAPLP
PSSGQGSVWNSNGWQGGLADSAPYPPQEPVSRPAPREVRTPSRNGEGGGLLGDVLGSHGG
RQGLGEAFAKSVIRSLGSQVGTKVGGEVLRGILGSILKR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcgcaggtgtcatcctaggattccgacgaccggttttttaaaacggtacgga
gcaggactcatgacagaaacccccattctggtcggcactggtgagcatgaagcacgtctg
ctgcccgcttttgccaaccggcatggcctgattgcaggggcgaccggcaccggcaagaca
atcactcttcaggtgctggcggaatccctgtccgctgccggggtgccggtcttgtgtgcg
gatgtgaaaggtgatctcgcggggttgtcgcagccgggcgcccccaatccgaagctggaa
cagcgcgcgtcccggctgggcgttcatgattacagctatcgtgccgcgcctgttgtattc
tgggacgtatttggggtttccggtcacaaggtgcgggccaccgtggcggagatggggccg
atcctgctttcacgcatgctggagttgaatgacacacaggaaggtgttctctccatcgcc
tttgcggtagcggatgatgaaggcctcctgctgcttgattacaaggatttgcgggctgtt
ctctcgcacgtggccgagcgggccggggagctgggcacagaatacggcaatgtcagcaag
gccacgatcggtacgatccagcgccgcctgctgagactggaacaggaaggcggagaagcc
tttttcggtgaaccggcgctggaactggctgatttactgctgatcacgccggatggacga
ggagcagtgaacatcctggcggcggatcggctgattcacagcccgcgcctgtatgcgact
gtgctgctttggctgctgtccactttatacgagaccttgccggaagtgggtgatctggag
cgccccaaactggtgtttttcttcgatgaggcacatctgctgtttgatgatgcccccaag
gcgctggtggacaaggtgacgcaggttgcgcgtctgatccgttccaagggagtcggagtt
tatttcgtgacacaaaatccgctggatattcctgcctctgtgctgggacagctcggtaat
cgtgtgcagcatgcgctgcgcgcttttacaccagcggaccagaaagcagtccgcgcggcg
gcggacacgttccgccagaatccgaggctgaataccgaggaggcgatcggatcacttgca
gtcggtgaagcgctggtttctttccttgacgagagcggatcaccctctgtcgtgcagaag
gttcagatcgtgccgccccgctcccgtataggggcgattacggcggaggaacgggcagag
atcatccgcaaaagtccggtcggtacgaaatacgatgcatcgattgaccggatcagcgct
tatgagcgcctttccgggcgcgcgacttccagccagcaagagaccgcccctgtttctcct
gcgccggtcgagccgggcggtgacccttggggcacagcgatgggaccggcacctttgccg
ccatcatccggacaaggatcggtctggaacagcaatggttggcagggtgggctggccgat
tcagccccttatcctccgcaagagccggtttcccgccccgccccgcgtgaagtccggacc
ccgtcccggaacggggaaggcggcgggttgctcggcgatgtgctcggcagccatggtggg
cgtcaggggctgggtgaggcgtttgccaaatccgtcatccgcagcctgggcagtcaggtc
ggtaccaaggttggtggggaagttctgcgtggtattctcggatccatcctgaaacgctga
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