Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_1008
Help
Entry
GbCGDNIH2_1008 CDS
T03083
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00260
Glycine, serine and threonine metabolism
gbh00460
Cyanoamino acid metabolism
gbh00630
Glyoxylate and dicarboxylate metabolism
gbh00670
One carbon pool by folate
gbh00680
Methane metabolism
gbh01100
Metabolic pathways
gbh01110
Biosynthesis of secondary metabolites
gbh01120
Microbial metabolism in diverse environments
gbh01200
Carbon metabolism
gbh01230
Biosynthesis of amino acids
gbh01240
Biosynthesis of cofactors
gbh04981
Folate transport and metabolism
Module
gbh_M00140
C1-unit interconversion, prokaryotes
gbh_M00346
Formaldehyde assimilation, serine pathway
gbh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH2_1008
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH2_1008
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GbCGDNIH2_1008
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GbCGDNIH2_1008
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GbCGDNIH2_1008
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GbCGDNIH2_1008
Enzymes [BR:
gbh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GbCGDNIH2_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHJ69205
UniProt:
A0AAN0RDN1
LinkDB
All DBs
Position
complement(1189716..1191020)
Genome browser
AA seq
434 aa
AA seq
DB search
MNTMSASALDAFFGARLADTDPDLFAALEKEFHRQEDGIELIASENIVSAAVLEAQGSVL
TNKYAEGYPGKRYYGGCAAVDIAEQLAIDRAKQLFGCEFANVQPHSGAQANGAVFFALAK
PGDTILGMSLAAGGHLTHGAAPTVSGKWFNAVQYGVRKEDGLLDYEELEALAREHKPKII
IAGGSAYPRFIDFPRIRKVADEVGAYFMVDMAHFAGLVAAGIYPSPLPHAHVVTTTTHKT
LRGPRGGMILTNDLELGKKFNTAVFPGLQGGPLMHVIAAKAVAFGEALKPDFKTYQQSVA
NNAKVLASTLVERGLAIVSGGTDTHLMLVDLRPKNVTGKATDESLGRAHITTNKNAIPFD
PQKPAVTSGIRLGTPAGTSRGFGEAEFREIGLMIDRVVEGLSKAGENGSNEAVEQEVGAE
VKALCKRFPLYRNH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatgtccgcatccgcccttgatgcctttttcggcgcacgcctcgccgatact
gatcccgacctgttcgcggccctggaaaaagaatttcaccgtcaggaagacggtatcgaa
ctgatcgccagcgaaaacatcgtttctgcggcggttctggaagctcagggttccgtcctg
accaataaatatgccgagggttatcccggcaagcgctactacggtggttgcgcggcggtc
gacatcgccgagcagctcgccattgaccgcgccaagcagctgttcggctgcgaattcgcc
aacgtgcagccgcattccggcgcacaggccaatggcgcggtgttcttcgcactggccaag
ccgggcgacaccattctgggcatgagcctcgccgctggcggccatctgacccatggtgcg
gcccccaccgtcagcggcaagtggttcaacgcagttcagtacggcgtccgcaaggaagac
ggcctgctggattatgaggagctggaagccctcgcccgcgagcacaagccgaagatcatc
atcgccggtggctctgcctatccgcgctttatcgacttcccccgcatccgtaaggtcgca
gatgaagtcggcgcgtatttcatggtcgacatggcgcatttcgccggtctggtcgcagcc
ggcatctatccgtccccgctgccgcatgcgcatgtggtcaccaccaccacccataagacc
ctgcgtggcccgcgtggcggcatgatcctcaccaatgaccttgagctgggcaagaaattc
aacaccgccgtgttccccggtctgcaaggtggcccgctgatgcatgtcatcgctgccaag
gccgttgccttcggggaagccctgaagccggacttcaagacctatcagcaatccgttgcc
aacaatgcgaaggttctggcttccacgctggtggaacgcgggctggccattgtgtccggc
ggcaccgacacccatctgatgctggtcgatctgcgtccgaagaatgtgaccggcaaagcc
actgatgagagcctcggccgcgcccatatcaccaccaacaagaacgccattccgttcgac
ccgcagaagcccgccgtgacctccggcattcgtctcggcacgccggccggcacgtcccgc
ggctttggcgaggctgaattccgcgagatcgggctgatgatcgaccgcgtggtggaaggc
ttgtccaaggctggcgaaaacggctccaacgaagccgtcgagcaggaagtcggcgccgag
gtcaaggcgctctgcaagcgtttcccgctctatcgcaatcactga
DBGET
integrated database retrieval system