Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_1318
Help
Entry
GbCGDNIH2_1318 CDS
T03083
Name
(GenBank) tRNA (Uracil-5-) -methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gbh03009
]
GbCGDNIH2_1318
Enzymes [BR:
gbh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GbCGDNIH2_1318
Ribosome biogenesis [BR:
gbh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GbCGDNIH2_1318
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AHJ68876
LinkDB
All DBs
Position
1514878..1516119
Genome browser
AA seq
413 aa
AA seq
DB search
MTIALRVARLGAEADGVCPAEGDHPTIYVPYALDGELVEVSEAGKRGDALIGQIERILEP
SPHRVEPVCQHFGICGGCAMQHTDDGGLGWKAGQVASALKAVAPDVLSDAFSTWQSPPAV
RRRIDFGLRRSGKTVRVGLHRARSAEIVDIQHCPVIDPSLMELIAALRIVLPTLALLKRE
GSAVANMTENGIDLLLRTDRLPSVEDRTLLAAFAHQHGLARISWAEGERGRSEVLCQLRD
PVITFSGHSITAPPGAFLQASRAAEDAIMAAIEAGLPKKRRKIVELFAGIGTFTLRLKPG
MAYEGDEAAVAAVKRAGFGQITRRDLFRQPLQAAELRGVDVVILDPPHAGAAAQCATLAQ
AKVPRIIYVSCNPHALRRDATLLAGAGYRLVSASVIDQFLWSTQIETVAVFSL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcattgcgggtcgctcgtctcggcgcggaggctgatggagtttgcccggct
gaaggggatcatccgactatctacgttccgtatgccctggacggagaactggtcgaggtt
tccgaagcgggcaagcgtggcgatgcgctgattggccagatcgagcgcattctggaaccc
agtccgcatcgtgtagagccggtctgtcagcatttcggcatttgcggcggatgcgccatg
cagcataccgatgatggcggccttggctggaaagctggacaggttgcctctgctctcaaa
gcagtggcaccggatgtgctatctgatgctttcagcacatggcaaagcccacctgctgtg
cggcgcaggattgatttcgggttgcgccgtagcggcaaaaccgttcgggtcgggctgcac
cgcgcccgctctgccgagattgtcgacattcagcactgcccggtgattgatccctccctg
atggagctgattgccgcactgcgtatcgtgctgcctactctcgctttgctgaaacgtgaa
ggcagcgctgtcgccaatatgacggaaaacgggattgatctgctgctgcgcacggatcgc
ctcccttctgtcgaggatcgcaccctgctggcggctttcgcccatcaacacgggctggcc
cgcatttcctgggccgagggggagcggggacgctccgaggtactgtgccagttgcgtgac
cccgttattaccttcagcggacacagcatcacggcccctccgggcgcctttcttcaggcc
agccgcgccgcagaagatgccattatggcagccatcgaagccggactgccgaaaaagcga
cgcaagatcgtcgaattattcgcgggtatcggtaccttcaccctgcgcctgaaacccggc
atggcctatgaaggcgatgaagccgccgtcgctgctgtcaagcgggccggatttggccag
atcactcgcagagacctgttccgccagccgctgcaagccgccgagctgcgcggggtggat
gtcgtgattctcgatccaccccatgccggtgcggcggcacaatgcgccacgctggcacaa
gccaaagtgccccggatcatctatgtcagctgcaatccgcatgccctgcggcgggatgcc
acccttctggccggagctggctacaggctggtatcggcctcagtgatcgaccagtttctc
tggtccacgcagattgaaacggtggcggtgttcagcctctga
DBGET
integrated database retrieval system
