Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_2020
Help
Entry
GbCGDNIH2_2020 CDS
T03083
Name
(GenBank) Integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbh03032
]
GbCGDNIH2_2020
03036 Chromosome and associated proteins [BR:
gbh03036
]
GbCGDNIH2_2020
03400 DNA repair and recombination proteins [BR:
gbh03400
]
GbCGDNIH2_2020
DNA replication proteins [BR:
gbh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GbCGDNIH2_2020
Chromosome and associated proteins [BR:
gbh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GbCGDNIH2_2020
DNA repair and recombination proteins [BR:
gbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GbCGDNIH2_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
LigT_PEase
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHJ68123
LinkDB
All DBs
Position
complement(2300231..2300554)
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELIASLKADNPHLTERDVETIVSTIFDEISNALARGARVELRGFGAFTIKRRDARV
GRNPRTGETVSVDEKVVPFFKAGKELRERVNNGTRKNGGSADAASGG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggaactgatcgcgagtctgaaggccgataatccgcatctgacggaacgc
gatgtggaaaccatcgtctccacgatttttgatgagatttccaatgctcttgcccgtggt
gccagggtggagctgcgtggtttcggcgcttttacgatcaagcgacgggatgcccgggtg
gggcgcaacccgcgcaccggagaaaccgtttccgtcgatgaaaaggttgtccctttcttc
aaggccggaaaagaactgcgggagcgggtgaataacggtacccgcaagaatggcgggtct
gccgacgccgcttccggaggctga
DBGET
integrated database retrieval system
