Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_2142
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Entry
GbCGDNIH2_2142 CDS
T03083
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh03030
DNA replication
gbh03430
Mismatch repair
gbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GbCGDNIH2_2142
03430 Mismatch repair
GbCGDNIH2_2142
03440 Homologous recombination
GbCGDNIH2_2142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbh03032
]
GbCGDNIH2_2142
03400 DNA repair and recombination proteins [BR:
gbh03400
]
GbCGDNIH2_2142
Enzymes [BR:
gbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GbCGDNIH2_2142
DNA replication proteins [BR:
gbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GbCGDNIH2_2142
DNA repair and recombination proteins [BR:
gbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GbCGDNIH2_2142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHJ67995
LinkDB
All DBs
Position
complement(2424033..2424710)
Genome browser
AA seq
225 aa
AA seq
DB search
MSRSVLFDTETTGFDPLTGDRILEIAALELFNDLPTGNTFHTLVDPCRDVPEEATRVHGF
TAEMLRGKPLFADIMEDLLAFFGHDPLIAHNAPFDFNFLNAEFARLGKPKLDSARMIDTL
VMAKARFPGMPNSLDALCRRFSIDLSQRTTHNALLDCKLLAEVYIELTGGRQRGLGLTEA
ERAAAVAEYEHSASRVPRPIMPDEATLAAHEAFIDRLKDPVWRME
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgttctgttcgatacggagacgaccgggttcgaccctctcaccggggat
cgcatcctggaaatcgccgcgctggaactgttcaatgatctgccgaccggtaacactttc
cataccctggtcgatccgtgccgggacgtgccggaggaagcgacgcgggtgcatggtttt
acagcggagatgctgcggggaaagcctctgttcgctgatatcatggaggatctgctggct
tttttcggccatgatccgttgattgcgcataatgcaccgttcgacttcaactttctgaac
gccgaatttgcgcggttggggaagccgaagctcgattctgcccggatgattgatacgctg
gtgatggcaaaagcccgttttccgggcatgccgaacagtctggatgcgctctgtcgtcgc
ttcagcatcgacctgtcccagcgcaccacccataacgcgttgctcgactgcaagctgctg
gcggaggtctacatagaactgaccggaggccgtcagcgcgggctggggctgacggaggcc
gagcgtgcggccgctgtggcggaatatgaacattccgccagccgtgtgccgcgtccgatt
atgccggatgaggcaacgctggcggcccatgaagcctttatcgaccggctgaaagacccg
gtctggcggatggagtaa
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