Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_2180
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Entry
GbCGDNIH2_2180 CDS
T03083
Name
(GenBank) 60 kDa chaperonin GROEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GbCGDNIH2_2180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbh03019
]
GbCGDNIH2_2180
03110 Chaperones and folding catalysts [BR:
gbh03110
]
GbCGDNIH2_2180
03029 Mitochondrial biogenesis [BR:
gbh03029
]
GbCGDNIH2_2180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gbh04147
]
GbCGDNIH2_2180
Enzymes [BR:
gbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GbCGDNIH2_2180
Messenger RNA biogenesis [BR:
gbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GbCGDNIH2_2180
Chaperones and folding catalysts [BR:
gbh03110
]
Heat shock proteins
HSP60 / Chaperonin
GbCGDNIH2_2180
Mitochondrial biogenesis [BR:
gbh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GbCGDNIH2_2180
Exosome [BR:
gbh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GbCGDNIH2_2180
Exosomal proteins of other body fluids (saliva and urine)
GbCGDNIH2_2180
Exosomal proteins of breast cancer cells
GbCGDNIH2_2180
Exosomal proteins of colorectal cancer cells
GbCGDNIH2_2180
Exosomal proteins of bladder cancer cells
GbCGDNIH2_2180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHJ67954
UniProt:
A0AAN0VGM3
LinkDB
All DBs
Position
complement(2466296..2467930)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVKFGGDARQRMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELADKFENMGAQMVREVASKTNDKAGDGTTTATVLTQAIVREGAKAVAAGLNPMDLKRGI
DKAVAVVIEDLKANSRKITNPSETAQVGTISANGESEIGRMISEAMQKVGNEGVITVEEA
KGIQTELDVVEGMQFDRGYVSPYFITNPEKMIAELDNPYILIHEKKLAQLQPLLPLLESV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLETVTLQQLGTAKRVLIEKENTTIVEGAGSPDDIKGRCSQIRAQAEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALA
RASLKLADLGYDNGDQKVGIEIIRRALQSPLRQISENAGEDGAVIAGKVLENGTYNFGFD
AQTGEFKDLVSAGIIDPAKVVRTALQDAASVAALLITTEAMIAEKPEKKAPAGAPPGGMG
DMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagacgtaaaattcggtggcgacgcccgtcagcgcatgctgcgtggcgtg
gacattctggccgatgcggtgaaggtgacccttggtccgaaaggccgtaacgtggtcatc
gacaagagcttcggcgcaccccgcatcaccaaggacggcgtgagcgtcgccaaggaaatc
gagctggccgacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
accaatgacaaggccggtgacggcaccaccaccgcgaccgtcctgacccaggcgatcgtg
cgtgaaggcgccaaggccgtggccgctggcctgaacccgatggacctgaagcgcggcatc
gacaaggccgtcgccgtggtgatcgaggatctgaaggccaacagccgcaagatcaccaat
ccctccgagaccgctcaggtcggcaccatctccgccaatggcgaaagcgagatcggccgt
atgatctccgaggcgatgcagaaggtcggcaatgaaggcgtcatcacggttgaggaagcc
aagggcatccagaccgagctggacgtcgtcgaaggcatgcagttcgaccgtggctatgtc
tctccgtatttcatcacgaatccggagaagatgatcgcggagctggataacccctatatt
ctgatccacgaaaagaagctggcccagttgcagccgctgctgccgctgctggaaagcgtg
gtgcagtccggccgtccgctgctgatcatcgccgaggatgtcgagggcgaagccctggcc
accctggtcgtgaacaagctgcgtggtggtctgaagatcgcggccgtgaaggctccgggc
ttcggtgatcgtcgcaaggcgatgctggaagatatcgcgatcctgaccggtggtacggtg
atcagcgaagatctgggcatcaagctggaaaccgtcacccttcagcagctcggcaccgcg
aagcgcgtgctgatcgagaaggaaaacaccacgatcgtcgaaggcgccggttctcccgac
gacatcaagggccgttgcagccagatccgtgcgcaggcggaggaaaccacctctgactac
gaccgtgaaaagctgcaggaacgtctggcgaagctggcaggcggcgttgcggttatccgc
gtcggcggctccaccgaggtcgaggtgaaggagcgcaaggaccgcgtcgatgatgccctg
catgcgacccgtgccgcggtcgaggaaggcatcgttccgggtggtggcgtggctctggcc
cgtgcttccctgaagctggccgatctcggctatgacaatggcgaccagaaggtcggtatt
gaaattatccgccgtgccctgcagtcaccgctgcgtcagatctccgagaatgcgggtgaa
gacggtgcggtgatcgccggcaaggttctggaaaacggcacttataatttcggcttcgat
gcccagaccggcgagttcaaggatctggtgtcggccggtatcatcgacccggcgaaggtc
gtccgtacggctctgcaggatgcggcttccgtcgcagccctgctgatcaccaccgaggcg
atgattgccgagaagccggaaaagaaagctccggccggtgcgcctccgggcggcatgggc
gatatggatttctga
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