Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_5103
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Entry
GbCGDNIH2_5103 CDS
T03083
Name
(GenBank) Phage tail protein
KO
K21449
trimeric autotransporter adhesin
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbh02000
]
GbCGDNIH2_5103
Transporters [BR:
gbh02000
]
Other transporters
Pores ion channels [TC:
1
]
GbCGDNIH2_5103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMP_2
SLT
Bacteriocin_IIc
ZapB
Motif
Other DBs
NCBI-ProteinID:
AHJ69330
LinkDB
All DBs
Position
1070497..1076667
Genome browser
AA seq
2056 aa
AA seq
DB search
MALIEEIILRNTVEDNASAALDAGAEAADRFDGAMTRVGQTARRAASAVNDSTGRILEAS
PAYEKMAARVDEVSRLEARLARLLDSHTTLQEQLRREVERGSVSQEEANRVLTSSAQRVE
QLGASLGRARFEAEAHRTALAAQTGTLGASHDAMRGLAEAAAAQAQAQGMARRAAEESAR
AMAETAAAVASATRAQAAYNGVLGVRTDFSGAHRAADIAAYGSEMDRLRARFNPLFAASR
QYEDVLNDIERAEKIGALSAIEAAAARDRETAAFQRAHGVMDGTMQMHGHLAESSGAASA
AMRGLSIQAIQTVSGLATGQPVMMTLIQQGHQVADQMIATGASFSGLATAGRAAFAAIGG
LPAVAVAAMVAGIAAIGISAEKSGRQLLDLQETLRATRADYASAGAAVDAVSRSMAAQGL
GSLSDIRTASSSIAAVPTVAVSDLGGYVRQARDLARVMGQDVPTAAALLAQALQDPAAAA
RRLADAHQLGINPALAHTIELLQASGEASAASALLTRRMGEATRGAAADLTPLQQAVERL
SGSYHSGTSAVGEFARSTGDSITWLASAAIDGLTSVMGLLDRGAASMQALWNNSPEPMRR
ALGRAYEGAENPLSLFGYTGASSGNTSGSLTDTMASSARQRGFSTSELDLAQRIMRIESG
GQQYGRGGDVLTSGAGALGAFQIMPGTGARYGFSAQQLASPGGNVDAGLTIIADLWRRYD
GDPALVAIAYNGGTGLADAIHDGRSTFADLPQETQQYVKKLAAPVRAADQVAASQRTIDQ
AYTGAGGTLYAQRQDITASITLDAKAIREANTAFAEGRMSQDQYAETTGRLNVHLHQQQV
ALENLRSPAEEIIHSLREQAEQSGALAGASRDLLQMRQQLTSQGASQAEIDAATAAKQAA
LGNIFAQNVSTIDQQAHAIRIQADASLAGAAAAEHVANATKAEQQARETAIPGTAEYARQ
VQILTNSYDNLSAVQRDAQNGPAIEAHEQSIALLQREADVAGLGADAQDRLLSIYRESQT
VIAAGMDMSQPLAQRRIQLAAAEADARRYRDAMQANFSEISRFGDDLGSTIGTAITAGFA
NGTISALKFKDVMNAVASAAIQELMKLALINPLKNWLNGKNSGLATLDGVLSSLLGYGGS
SSSGRASGGYDMGSLMALGAGVSALVVSGGAGAAPSIGNSVSGAASGAAVSAGSTLGAIS
SVGSAAGGGDFFTILGVGASALKAADSLHLFSSSASAAASAANAAGNAAASAAHTSAGMV
GYVSDAVKAAKDGAVNALGTVKDGASSVLGTVGGTLNNATALASGYIASAINMVLYPSAY
AAGQALTMAGATGFAGIAGSASAAGFANAGISGAGYLSGAASATSGAANAAGAAGGISAS
TIAAAIPWISAVVGVAIPLIQGDLEKAGIVAGAAVTGAVIGTWVFPVLGTAVGAALGAMV
GSFFGPGPKNPYSQVDILNQDGHLAIGNAHQQVAGKTFDAQRENARAGIDAVNKMLDLFQ
IKIANTSDVLNNIPGGRVGIVGSGLESSIKAVRTFGELFPYLRFDAANDSSNYTRAAHGQ
IAGQSYADPNALAADLTAVANFATGLDALGIHLNAMDRNFKNLQIGKADWADSSTFSRGL
AGALPGHTYADQTALQQAIQQVYSFTEGTVPALLQATTRPTSAFEKQIADLNKPYAEASG
QAQAWGLNDVVQQLADKFAQLSSELFAQQLRGLREADLSVTYRGMAASNGSASSVDAAMS
TFDIKAQQQREALKKSWQDVYGDSATAMAEYVQQSVNLERTLSSERLQAQTIGNLQLAAS
FQQSNVTRVGYISADWRAQARLISANDNSAWGQGATRFLNQGADLIDFDQSSKLQITNYR
ASLIQLYGTSYAQTSDYAGRIAEAEQSLATQRLAIIASYAAQAKEAEKSAQANITGLING
IGDWATRLAQGDQSALSPQAKLDLARSQYQAVSGAALAGDYNSAQKFTGYADTYLAAAKA
FYGSTADYAAAFSSVTTDALKITQMPPDTLTASAMTAAMKAQTAELVESLGKVQATLQQL
LLVTKQGNSAISRIAS
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatcgaagaaatcatcctgcgtaatacggtcgaggataacgcctctgcagca
ctggatgcgggggcggaggctgccgaccggttcgacggggccatgacgcgtgtcggccag
acggcgcggcgtgccgccagtgcggtcaatgacagcacgggccgtattctggaagcgtct
ccggcctatgagaaaatggcggcgcgcgtggatgaagtttcacggctggaagcccggctg
gcgcggctgctggacagtcacaccaccttgcaggagcagctgcgccgcgaggtcgagcgt
ggctctgtatcgcaggaggaagcaaaccgcgtcctgacctccagcgcgcagcgcgtggag
cagcttggcgccagcctgggcagggcgcggtttgaggcggaagcgcatcgcactgcactg
gccgcgcagaccggcacgctgggggccagccatgatgccatgcgcggcctggcggaggct
gctgcggcacaggcgcaggcacagggcatggcgcggcgtgcggctgaggaatcagcccgt
gccatggcggaaacagccgccgctgtggcgtccgcgacccgtgcgcaggcagcgtataac
ggcgtgctcggcgtgcgcaccgatttcagcggtgctcaccgggcggcggatattgcagcg
tatggatcggagatggaccggctgcgcgcgcgcttcaatccgctctttgccgcctcccgc
caatatgaggatgtgctgaacgacatcgagcgggctgagaaaatcggcgcgttgagcgcg
atcgaagctgcggcagcgcgggatcgtgaaaccgccgcttttcagcgtgcgcatggtgtg
atggatggcaccatgcagatgcacgggcatcttgcagaatcttctggcgcagccagtgca
gccatgcgtggcctgtccattcaggccatccagaccgtcagcggccttgcgactggccag
ccggtgatgatgacgctgatccagcagggccatcaggtggcggatcagatgatcgccact
ggagcctctttcagcggtctggcgactgccggacgtgccgctttcgcggccattggcggc
cttcctgctgtcgccgtggccgccatggtggcgggcatcgccgccatcggcatcagtgct
gaaaaatccggtcgtcagctgcttgatttgcaggaaacactgcgtgccacacgggcggat
tatgcctccgccggggcagccgttgatgcagtctcccgcagcatggcggcgcagggcctc
ggctccctgtcggatatacgcacggcgtcatcgagcatagcggcggtgccgacagtggcg
gtcagcgatctgggtggatacgtgcggcaggcccgtgatctggcgcgggtgatgggacag
gatgtgccgacagcagccgccctgctggcgcaggccctgcaggatccggcagcggcagcg
cgccgtctggcggatgcccaccagctcggcatcaaccccgcgctggcccatacgatcgag
ctgttgcaggcatccggcgaagcctcggctgcatctgccctcctgaccaggcgtatgggt
gaagccacacgaggcgctgccgctgacctgacgccactgcagcaggccgtcgagcgtctc
tcaggctcataccattccggaaccagtgccgttggcgaattcgcgcggtcaaccggcgat
tccatcacctggctggcctctgcggcgattgacgggctgacatccgtgatggggctgctg
gatcgtggcgcggcctccatgcaggcactctggaacaatagtccggagccgatgcggcgg
gcgcttggccgggcgtatgagggcgcggaaaacccgctttccctgttcggctataccggt
gcatcttccggcaacacgtccggcagtcttaccgacacgatggccagcagcgcccggcaa
cgtggtttcagcacgtcagaactggacctggcgcagcggatcatgcggatcgaaagcggc
ggccagcaatacggacgcgggggtgatgtgctgacctccggagcgggcgcactcggcgca
ttccagatcatgcccggcactggcgcacgatacgggttttccgcgcagcagctcgcttcc
cccggcggcaatgtcgatgccggtctgaccattattgccgatctgtggcggcgctatgat
ggcgatccggcgctggtcgccatcgcctataatggcggcaccgggctggccgatgcgatc
cacgacggcaggagcacctttgctgatctcccgcaggaaacgcagcaatatgtgaaaaaa
ctggccgcgcctgttcgtgcggcggatcaggtggcagcatcacagcgcaccatcgatcag
gcttataccggtgctggcggcacactctatgcgcagcggcaggatatcaccgcctccatc
actctggatgcaaaggcgatccgggaggcaaatacagccttcgccgagggtcgaatgtcg
caggatcaatacgcggagaccaccggtcgcctgaacgtccatttgcatcagcagcaggtg
gcactggaaaatctgcgcagcccggctgaggaaatcattcactccctgcgggaacaggcc
gaacagtccggtgcgctggccggggccagccgcgatctgcttcagatgcgccagcagctg
accagtcagggcgcatcgcaggcggagattgacgccgccacggcagcgaaacaggccgcg
ctgggcaacatcttcgcgcaaaatgtcagcacgattgatcagcaggcgcatgcgatccgc
attcaggccgatgcctctctggcaggcgcggcggcggcggagcatgtcgcaaacgcgacg
aaagcggagcagcaggcccgggaaacggctattcccggcaccgccgaatatgcgcgtcag
gtgcagatcctgaccaacagctatgacaacctgtccgctgtccagcgggatgcccaaaac
ggcccggcgatagaggcgcatgagcaatcgattgcactgctgcagcgtgaagcggatgtg
gccggcctcggggccgatgcgcaggatcggctgctttccatttaccgtgaatcccaaacg
gtgatcgcggcaggcatggatatgagccagccgctggcccagcgccgcatccagcttgcg
gcggcggaggcggatgccaggcgctaccgcgatgccatgcaggcgaatttctcggaaatc
agccgcttcggggatgatctcggttccaccatcggcactgccatcaccgcaggctttgcc
aacggcaccatcagcgcgctgaaattcaaggatgtgatgaatgcggtggccagcgccgcc
attcaggaactgatgaaactggcgctgatcaacccgctgaaaaactggctgaacggcaag
aatagcggtctggccacgctggatggcgttttgtcatctctgctcggatatggcggttca
tcttcctccgggcgtgcatcaggcggctatgacatgggcagcctcatggcgctgggggct
ggtgtcagtgcgttggtggtcagcggcggtgcgggggcggcgccgtcgatcggaaacagc
gtcagcggtgcggcgtcaggggccgctgtctcggcgggcagcacgctgggcgcgatttcc
tcggtcggctccgcggcgggtgggggtgatttcttcacgatccttggtgtcggagcatct
gcgctgaaggcagccgacagtctgcatctgttcagcagcagcgcctcggcagccgccagt
gcagccaatgcggcaggcaacgcggcggcgagtgcggcccacaccagcgccggaatggtg
gggtatgtgtctgacgccgtgaaggcagcgaaagatggtgctgtcaatgcactggggacg
gtaaaggatggtgcctccagcgtgctcggcacggttggcggcacgctgaataacgcgacg
gcgctggcgtcaggctatatcgcaagcgccatcaatatggtgctgtatccgtctgcctat
gctgccggtcaggccctgacaatggcaggggcaaccgggttcgccgggatcgcgggaagc
gcgtcggcggccggttttgcaaacgctggcatatcaggcgctggttatctctcaggtgcg
gcctctgcaaccagtggtgcagccaatgccgccggagcggcaggcggtatttctgcgtcc
acgattgcagcagccatcccctggatttctgccgttgttggggtcgccatccctctcata
caaggcgatctagaaaaggcaggtatcgtagcgggtgcggcggtaacaggagccgtcatt
ggcacatgggtattccctgtgttgggcactgcggttggtgctgcgctgggtgcgatggtc
ggttctttcttcggccccggtccgaagaacccctattctcaggtcgatatcctcaatcag
gacggtcatcttgccatcggtaacgcgcatcagcaggtcgcaggaaaaacgtttgatgcc
cagagggaaaacgcccgtgccggcatcgatgctgtcaacaaaatgctcgatctgttccag
atcaaaattgcgaacaccagtgacgttctgaacaacattccgggtggtcgggtcggcatc
gtcggcagtggcctggaaagcagcatcaaggccgtccgcactttcggcgagttgttccct
tatctgcgctttgatgcagcgaatgacagcagcaattacacacgtgccgcgcatggccag
attgcgggtcagtcctatgccgatcccaacgcgctggccgctgatctgacggcggtggcg
aattttgcaaccgggctggatgcgttgggtatccatctcaacgcgatggatcgcaatttc
aaaaatcttcagatcggcaaagcggactgggcagacagcagcactttctcgcgcggtctg
gcgggcgcgctgccgggccacacctatgccgatcagaccgcactacagcaggccatccag
caggtctacagtttcacggaaggaacggtgccagctctgctgcaggctacgaccagacca
accagcgcatttgaaaagcagattgccgacctcaacaagccgtatgcggaggcatccggg
caggcgcaggcatggggcctgaatgatgtggtgcagcagctggcggataaattcgctcag
ctgtccagtgagctgttcgcccagcagctgcggggtctgcgggaggctgatctgtccgtc
acctatcgcggcatggcggcctcgaacggctcggcctcctcggtcgatgccgccatgagc
actttcgacatcaaggctcaacagcagcgcgaagccctgaaaaaatcatggcaggatgtc
tacggcgattccgcaacggccatggccgaatatgtccagcaatccgtgaatctggaacgg
acgctttcgtctgaacggctacaggcacagaccatcggcaaccttcagctcgcagccagc
ttccagcaatcgaatgtgacgcgggttggctatatctcggcggactggcgggcgcaggcg
cgtctgatctctgccaacgataactcggcatgggggcaaggggcgacgcgctttctgaat
cagggtgctgatctgatcgattttgatcaatcatcgaagctgcagatcaccaattaccgc
gccagcctgatccagctttatggcacatcctatgcacagacatccgactatgccggcagg
atcgccgaggcagaacagagtctggcgacccaacgtctggccatcatcgcgtcctatgcc
gcgcaggcgaaggaagcggaaaaatccgcacaggcgaatatcaccggtctgatcaacggc
attggcgactgggccacaaggctcgcgcagggagatcagtccgcgctgtctccacaggca
aagctggatctggcgcgcagccagtatcaggccgtgtccggtgctgctctcgctggcgat
tataactcggctcaaaaattcaccggttatgcggacacgtatctggccgcggcaaaagcg
ttctacggcagcacggcagattacgcggcagccttttcttccgtcacgaccgacgcgctg
aaaatcacgcagatgccccccgatactctcacggcgtctgccatgacagcagccatgaag
gcccagaccgcagagctggtggagtcactcggcaaggtgcaggcaaccttgcagcaactg
cttctggtcacgaagcagggcaattccgccatcagccggattgcgtcatga
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