Immundisolibacter cernigliae: PG2T_00450
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Entry
PG2T_00450 CDS
T04454
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gbi
Immundisolibacter cernigliae
Pathway
gbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG2T_00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbi03019
]
PG2T_00450
Enzymes [BR:
gbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PG2T_00450
Messenger RNA biogenesis [BR:
gbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PG2T_00450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
UTP25
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANX05414
UniProt:
A0A1B1YX20
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All DBs
Position
complement(72961..74241)
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AA seq
426 aa
AA seq
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MPFDVLPLDPRLKASVAATGFTHCTPIQEQALPRLLAGKDVAGQAQTGTGKTATFLLALF
NHLLREPPRPGRLPTQPRALVMAPTRELVIQIYRDAQALGQGLDITLGLAYGGVDYDKQR
DQIAAGVDVLIGTPGRLIDFLNQGVYDLSAGQVIVLDEADRMFDLGFIKDVRYMMRRLPP
PQERLSMMFSATLAQRVLELAYEHMHDPELVRIEPEKVTVDRVRQVIYHTATDEKIRLLI
GLLQSLPEARSMVFVNTKAEAERVWGYLQTNDIPAGLMTGDVQQRKRERLLEQFRKGELA
ALVATDVAARGLHIDGVTHVFNYDLPQDAEDYVHRIGRTARAGAAGEAISFGCERYVYSL
PEIEKYIGQKLPVEPVPHDMLVRPKPRVRLAEEDRVAPRPGAGGGRSGGGGSGGGSSRRR
PPRRTH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ctgccgttcgatgtgctgccactggacccgcggctgaaggcgagcgtggctgcaacgggt
tttacgcactgtacgccaattcaggagcaggccttgccgcggctgctggcgggcaaggac
gtcgccggccaggcgcagaccggcaccggcaagacggcgaccttcctgctggccctgttc
aatcatctgctgcgcgaaccgccgcggcccggccgcctgccaacccagccgcgggcgctg
gtgatggcgccgacccgcgagctggtgatccagatttaccgcgacgcgcaggcgctgggg
cagggactcgacatcacgctgggcctggcctatggcggggttgattacgacaagcagcgg
gaccagatcgccgccggcgtggatgtgctgatcggcacgcccgggcgcctgatcgatttt
ctgaaccagggcgtttacgacctgtcggcagggcaggtgattgtgctcgacgaggccgac
cggatgttcgacctgggcttcatcaaggacgtgcgctacatgatgcggcgcctgccgccg
ccgcaggaacgcctgtcgatgatgttctcggcgacgctcgcccagcgcgtgctggaactg
gcctacgagcacatgcacgacccggaactggtgcgcatcgagccggaaaaggtcaccgtc
gatcgcgtgcgtcaggtgatctaccacaccgccaccgacgagaaaattcgcctgctgatc
ggtctgctgcagtcgctgccagaggcccgcagcatggtgttcgtcaacaccaaggccgaa
gccgagcgcgtgtggggctacttgcagaccaacgacattccggccggcctgatgaccggc
gacgtgcagcagcgtaagcgcgagcgtctgctcgaacagttccgcaagggtgaactggcg
gcactggtggccaccgacgtggccgcccgcggcctgcacatcgacggcgtgacgcacgtg
ttcaattacgacctgccgcaggatgccgaggattacgtgcaccgcatcggccgcacggcg
cgcgccggcgccgccggcgaggcgatcagcttcggctgtgagcgttacgtgtactcgctg
ccggagatcgaaaagtacatcgggcagaagttgccggtagaaccggtgccacacgacatg
ctggtcagaccgaagccgcgcgtgcgcctggcggaggaagaccgcgtggcgcccaggccc
ggcgccggtggtggtcgttccggtggtggtggtagtggtggcggatcatcgcgtcgccgg
ccaccgcgacggacgcactga
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