Immundisolibacter cernigliae: PG2T_00835
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Entry
PG2T_00835 CDS
T04454
Name
(GenBank) hypothetical protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
gbi
Immundisolibacter cernigliae
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbi03019
]
PG2T_00835
Enzymes [BR:
gbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PG2T_00835
Messenger RNA biogenesis [BR:
gbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PG2T_00835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
AAA_25
T2SSE
AAA_16
SRP54
ABC_tran
AAA_30
NACHT
AAA_23
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ANX02882
UniProt:
A0A1B1YQ47
LinkDB
All DBs
Position
166880..170761
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AA seq
1293 aa
AA seq
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MLSSGVQTLAAQVEDALLADRPALAKRLAALQRRLAGGQPADRLQAEVAAQLARSAAVVS
ARRAARPASVTFPPELPITAHLPEITAALQAHQVIVVCGETGSGKTTQLAKLCLHLGRGV
HGRIGHTQPRRIAARAVAARLAVELAAPRAVGYSVRFDDTVADGAAIQVLTDGLLLAHAQ
SDPQLLAYDTLIIDEAHERSLNIDFLLGYLHRLLPQRPDLRLIITSATIDPQRFAQHFGG
APIIEVSGRGHPVEVRYRPLLTPDPDQADRTLVEGIVAAVAELQGEGPGDVLVFLPGERE
IRDATEALRAHGTAGLELLPLYARLSRAEQDRVFAPSKQRRVVLATNVAETSLTVPGIRY
VVDSGLARVSRYGARSHVQRLGIEKISQAAADQRAGRCGRLGPGVCIRLYAQDDYANRNP
YTDPEIHRASLASVVLRMQALQLGEAADFPFLDPPQRRHLRAAQQALFELGAVDSAGVLT
GVGRQLARFALDPALGRMLIEAGRTGALHEVLIITAALTVPDVRERPLDAREHADQVHRQ
FADARSDFLGLLNIYRAFEQEARHRSQAKLRLWCREHFLSYLRLREWRDIAGQLTELANG
MGLRGSSLGADYDAIHRALLAGLLGRIARRQDGPRGESRRARLSRGLEGARGAQMWVFPG
SALAKKPPRWLMAAELVETGRLYARTVAAIEPHWVEAAAAHLLRRDYSEPQWDVASRRPV
AFERVTLFGLTLASRRRIAYGPIDPAHARAIFIREGVIDGALDAACPALAANRRLLGELE
TLQAKARRPLLIDEDALFALYDARLPPDVWDGHRFDHWLRRQAPDALRLSAEQLLIDRAD
AITPQDFPDRLAAGGALLPLRYRFEPGHDDDGITVRLPRALLQRIDAHVFDWLIPGWLPE
KCAALIRSLPGALRRQFVPAPDYAGQALARLKPGTGPLLPALAGALSDLAGAPCPPEAFD
PDRLDRHLRLRFEIVDEHGTALATGRDWSQLQARFGQTRTPVATAGRPHPLERSGITDWD
FGALPRQVTTPGPGGALLLRWPALVDTGDDCAVRLFDDEAAAAVAHRGGVRALLTRALAD
RLPTPDTLAPAAALYRRLGTPTQLLRDLQRAIIDSAWDDPNAPRDGAEFAVLVAALQPLL
APTSDRLTKSVTDTLRAWRDIERRLDHATTLALLEVAADLRDQLGRLIYSGFVEKTPPPW
LAELPRYLNAAATRLERAQRDPACERADRQALLPLWQAFWHAYPPHADNPAWIELRWLLE
ELRVALFAPHLGTTQPVSVARLQRLFDVAKAGA
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtcatccggcgtgcagacactggcagcgcaggtcgaagacgccttgctggccgac
cgacccgcgcttgcgaaacgcctcgccgcgctgcagcggcggctcgccggcgggcagccc
gccgatcggctgcaggctgaggtcgccgcccagctcgcccgctccgcggcggtggtcagc
gcgcggcgggccgcacggccggcaagcgtcacgttcccgcccgagctgccgataaccgcc
catctgccggaaatcaccgccgccctgcaggcgcatcaggtgatcgtggtctgcggcgag
accggctcgggcaagaccacgcagctggccaagctgtgcctgcatctgggccgtggcgtg
catggccgcatcggccacacccagccgcggcgcatcgccgcccgcgcggtggcggcgcgt
ctggcggtggaactggccgcgccgcgtgcagtcggctacagcgtgcgcttcgacgacacg
gtcgccgacggcgccgccatccaggtgctgaccgacggcctgctgctggcgcacgcgcag
tccgatccgcagctgctggcctacgacacgctgatcatcgacgaggcgcacgagcgcagc
ctgaacatcgattttctgctcggctacctgcaccgcctgttgccgcagcggccggacctg
cgcctgatcatcacctcggccaccatcgacccgcagcgctttgcgcagcacttcggcggc
gcgccgatcatcgaggtatccggccgcggtcatccggtcgaggtgcgctaccgcccgctg
ctcacgccggaccccgaccaggccgaccgcacgctggtggagggcatcgtggccgccgtc
gcggaattgcagggcgaaggcccgggtgatgtgctggtgttcctgcccggcgagcgggag
atccgcgacgccaccgaggcgctgcgcgcgcacggcaccgccggcctggaactgctgccg
ctgtacgctcgtctgtcgcgcgccgagcaggaccgggtgttcgcgccctccaaacagcgc
cgcgtggtgctggccaccaacgtggccgagacctcgctgaccgtgcccggcattcgctac
gtggtcgacagcggcctggcgcgtgtcagccgctatggcgcccgcagccatgtgcagcgt
ctgggcatcgagaaaatctcccaggccgccgccgatcagcgcgccgggcgctgcggccgg
ctcggccccggcgtgtgcatccgcctgtatgcgcaggacgattacgccaaccgcaatccc
tataccgatccggaaatccaccgcgccagcctggccagcgtggtgctgcgcatgcaggcc
ttgcagttgggcgaggcggcggattttccgttcctggacccgccgcagcggcgccacctg
cgggccgcgcagcaagccctgttcgagttgggcgcggtggacagtgccggggtgctgacc
ggcgtcggtcggcaactggcgcgctttgcgctcgatccggcgctcggccgcatgctgatc
gaggccggccgaaccggcgcgctgcacgaagtgctgatcatcaccgccgcgctgaccgtg
ccggacgtgcgcgagcgcccgctcgacgcccgcgagcacgccgaccaggtgcaccggcag
tttgccgacgcgcgctcggatttcctcggcttgctcaacatctatcgggccttcgagcag
gaagcccgccaccgctcgcaggccaagctgcgcctgtggtgccgcgagcattttttgtcc
tacctgcgccttcgcgaatggcgagacatcgccgggcaactcacggagctggccaacggc
atgggcctgcgcggctccagcctcggcgccgactacgacgccatccaccgcgcgctgctg
gcgggcctgctcggacgcatcgcccggcgccaggacggcccgcgcggcgaatcccggcgg
gcgcgcctgtcccgcggcctggagggcgcgcgcggcgcgcaaatgtgggtattccccggc
tcggccttggccaaaaaaccgccgcgctggctgatggccgccgagctggtggaaaccggt
cgcctgtatgcgcgcaccgtggccgccatcgagccgcactgggtggaggccgccgccgca
catttgctgcgccgcgactacagcgagccgcagtgggatgtcgccagccggcgcccggtg
gccttcgagcgggtgacgctgtttggcctgaccttggccagccggcgacgcattgcctat
ggcccaatcgatccggcccacgcgcgggccatcttcattcgcgagggcgtgatcgacggc
gcgctggatgccgcgtgcccggcgctggccgccaatcgccgcctgctgggggagcttgaa
acgctacaggccaaggcgcgccggccattgctgatcgacgaagacgccctgttcgcgctg
tacgacgcgcgcttgccgccggatgtctgggacgggcaccgcttcgaccactggttgcgc
cggcaggcgcccgatgcgctgcgcctgtccgccgagcagttgttgatcgaccgcgccgat
gcgatcacgcctcaggattttcctgatcgcctggcggccggcggcgcgctgctgccgctg
cgttaccgcttcgagcccggccacgacgacgacggcatcaccgtgcgcctgccgcgcgca
ctgctgcagcggatcgacgcccatgtcttcgactggctgattcccggctggctgcccgaa
aaatgcgcggcgctgatccgcagcctgcccggcgcgctgcgccgccagttcgtgccggca
ccggactacgccggtcaggcgctggcgcgattgaaaccgggcacaggtccgctgctgccg
gcgctggcaggtgcgctgtccgatctcgccggggcgccctgcccaccggaggctttcgac
cccgaccgcctggaccggcacctgcgcctgcgtttcgaaatcgtggatgagcacggcacg
gcgctggccaccggccgggactggtcgcagctgcaggcccgtttcggtcagactcggaca
cccgtcgcaaccgccggccgcccccacccgctggagcgcagcggtatcaccgactgggat
ttcggcgccctgccgcggcaggtgaccacgcccggccccggcggcgcgctgctgctgcgc
tggccggctctggtcgatacgggtgacgattgcgcggtgcgtctgttcgacgacgaggcc
gccgccgcggtagcgcatcgcggcggcgtgcgtgccctgctgacgcgcgccctggccgac
cggctgccgacgccggacacgctggcgccggcggcagcgctttaccggcgcctgggtacc
ccaacccagctgctgcgcgacctgcagcgggcgatcatcgacagcgcctgggatgatcca
aacgcaccacgcgacggcgccgaattcgccgtgctggtcgctgcactgcaacctctgctg
gctcccacgtcggacaggctcaccaagtccgtcaccgataccctgcgcgcctggcgggac
atcgagcgccgactcgaccacgccaccacgctggcgctgcttgaagtggccgccgacctg
cgcgaccagctcgggcgtttgatttacagcggctttgtcgaaaaaacgccgccgccgtgg
ctggccgaactgccgcgctacctgaacgccgcggcaacgcgcctggagcgcgcgcagcgc
gatccggcttgcgagcgcgccgatcgccaggccttgctgccgctgtggcaggcgttctgg
cacgcctacccgccccacgccgacaatccggcctggattgagctgcgctggctgctggag
gaattgcgggtcgcactgtttgcgccgcatctggggacgacgcagccagtatccgtcgcc
cggctgcagcgactcttcgatgtggcaaaagccggcgcttag
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