Immundisolibacter cernigliae: PG2T_04655
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Entry
PG2T_04655 CDS
T04454
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gbi
Immundisolibacter cernigliae
Pathway
gbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG2T_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbi03019
]
PG2T_04655
03009 Ribosome biogenesis [BR:
gbi03009
]
PG2T_04655
Enzymes [BR:
gbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PG2T_04655
Messenger RNA biogenesis [BR:
gbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PG2T_04655
Ribosome biogenesis [BR:
gbi03009
]
Prokaryotic type
rRNA processing factors
PG2T_04655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ANX03550
UniProt:
A0A1B1YRV9
LinkDB
All DBs
Position
complement(990796..993279)
Genome browser
AA seq
827 aa
AA seq
DB search
MKRILFNARQSEELRVAIVDGQHLFDLDIESPNRNQKKGNIYRAIVRRVEPSLEAAFVDY
GGTRHGFLPLKEVAATYLQGPNGEPGARQLREGQEVTIQVEKEERGTKGAALTTHVSLAG
RYLVLMPCSPDAGGVSRKIEGDDRAELKDLLGQLQLPANMGVIVRTVAAERSLAELQWDL
DHLVELWNAIDAASTGKSAPFLIYQENNVVARVIRDYFRDDIGEVLIDDEATYEEARALM
QQLMPQSLPKLKLYQDKVPLFTRYQIEHQIETAHRREVPLRSGGALVVDHTEALTAIDIN
SARSTGGSDIEETATNTNLEACDEIGRQLRLRDLGGLIVIDFIDMMKSSNQRAVEDRLRE
AVKHDRARIQLGKLSRFGLLEMSRQRLRPSLKETSHITCPRCEGQGTIRSVESTALHVLR
LLEEESLKERTGRLAVQVPVAVATYLFNEKRDAVSELGQRLGVNPIILPNPALETPHYEL
DRTRVQDLNKRLLDTPSHELALTVPAPEAAAAPAAIVAQPAAVQRLVRSAPPPSPVEATV
AAAPQPQAGLFTRLWRSLVGYQPPVSVEQAPQRHPRNRPPRPELPTTRAERDARPDRGRQ
GGNAQRPQAPAAPRNQPAVRDGQRDSQRDSSMPRDTHRDPAARDGQREPREGKSGRSRGR
RGGQRGQGQGGAEPRNNVPDAQARPVSPVAPEPREPVAVQPEWGTNIPSAPIAVVVPAVV
APAFEVSRDVQFDTPVFEPAMSPPVTDYAPLAAELQPPEHVPWAPVTPIEPPPAQESPQS
GWEPDPPPEPAFEPPAPVPSQVPASSPFMQVETVVAPAAQDKDAHAG
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaattctgttcaacgcccgccagtcggaagagctgcgggtggccatcgtcgat
ggccaacacctgtttgacctcgatatcgaatcgccgaaccgcaaccagaaaaagggcaac
atctaccgcgccatcgtgcgccgcgtcgagccgagtctggaagcggccttcgtcgactat
ggcggcacccgccacggctttctgccgctgaaggaagtcgctgcgacctatctgcagggc
ccgaacggcgaaccgggcgcccgccaactgcgcgaaggccaggaagtcaccatccaggtc
gagaaggaagagcgcggcaccaagggcgcggccctgaccacgcatgtcagcctggccggc
cgctatctggtgctgatgccgtgcagtccggacgccggcggcgtgtcgcgcaagatcgag
ggcgatgaccgggcggaactcaaagacctgctggggcaactgcaactgccggccaacatg
ggcgtcatcgtgcgcacggtggccgccgagcgcagcctggccgagctgcagtgggatctg
gaccacctggtcgagctgtggaacgccatcgatgcggccagcaccggcaagtccgccccg
ttcctgatctaccaggaaaacaacgtcgtggcgcgggtcatccgtgactacttccgggat
gacatcggcgaagtgctgatcgacgacgaggccacctacgaggaggcccgcgcgctgatg
cagcagctgatgccgcaaagcctgcccaagctgaagctgtaccaggacaaggtgccgctg
ttcacgcgctaccagatcgagcaccagatcgagaccgcgcaccggcgcgaggtgccgctg
cgctccggcggtgcgctggtggtcgaccataccgaggcgttgaccgccatcgacatcaac
tcggcgcgctccacgggcggcagcgacatcgaggagacggccaccaacaccaatctggaa
gcctgcgacgagatcggccgccagcttcggctgcgcgatctgggcgggctgatcgtgatc
gacttcatcgacatgatgaaaagcagcaaccagcgggcggtggaagaccgcctgcgggag
gcggtcaagcacgaccgggcgcgcatccagctgggcaagctgtcgcgcttcgggctgctc
gaaatgtcgcgccagcgcctgcgtccctcgctgaaggaaaccagccacatcacctgcccg
cgctgcgagggccagggcaccatccgcagcgtggagtcgaccgccctgcacgtgctgcgc
ctgctggaggaagaatccctcaaggagcgcaccggtcgcctggcggtgcaggtgccggtg
gcggtggcgacctatctgttcaacgaaaagcgtgacgcggtgtccgagctgggtcagcgc
ctgggcgtgaaccccatcatcctgcccaacccggcgctcgaaaccccgcattacgagctc
gaccgcacgcgcgtgcaggacctgaacaagcgcctgctggatacgcccagccatgaactg
gcgctgaccgtgccggcgccggaagcggctgccgcaccggcggcgatcgtggcgcagccg
gcggccgtgcagcgcctggtgcgcagcgcgccgccgccaagtccggttgaggcaactgta
gcggcggcgccacagccgcaggctggcctgttcacccgcctgtggcgcagtctggttggc
tatcagccgcccgtgtcggtggagcaggccccgcagcgtcatccgcgaaaccgtccgccg
cgccctgaactacccacgactcgtgcggagcgggacgcccgcccggaccgcggccgccag
ggcggcaacgcgcagcggcctcaggcgccagcggcgccgcgcaaccagccggctgtgcgc
gatggccaacgcgacagccagcgtgattcgtccatgccccgcgacacgcatcgcgatccg
gcggcccgcgatggtcaacgggagccgcgcgagggtaaatccggtcgcagccgtggccgc
cgcgggggtcaacgcggacagggccagggtggcgccgagcccaggaacaacgtccctgac
gcgcaggcgcgccctgtgtcgccggtcgcgcccgagccgcgcgaaccggtcgccgtccaa
cccgaatggggtacgaatatcccgtcggcgccgattgccgttgtggtgcctgcagtcgtt
gccccggcgtttgaggtgagccgggacgtccagttcgacacgccggttttcgagccagcg
atgtcgccgccggtaaccgactacgcaccgttggctgcggaactccagccgccggagcac
gtgccctgggcgccggtaacgcccatcgagccgccgccggctcaggaaagcccgcagtcc
gggtgggagcccgacccgccgcccgaaccggccttcgagccgccggcgccggtgccgtcg
caggttcctgcgagcagtccgttcatgcaggtcgagacggtcgttgcgccggccgcacag
gacaaggacgcgcacgcgggctga
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