Immundisolibacter cernigliae: PG2T_10555
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Entry
PG2T_10555 CDS
T04454
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gbi
Immundisolibacter cernigliae
Pathway
gbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PG2T_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbi03400
]
PG2T_10555
Enzymes [BR:
gbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PG2T_10555
DNA repair and recombination proteins [BR:
gbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PG2T_10555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ANX04569
UniProt:
A0A1B1YV11
LinkDB
All DBs
Position
2215471..2216253
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AA seq
260 aa
AA seq
DB search
MPLKIITLNVNGIRSAWRKGLADFLAREQADLVCLQETRVQHPQLTEEMRAPHLCQSFFH
HATKPGYSGVAIYTRRAPDRVVEGLGWPDFDAEGRWLQVDYGKLSVVSLYLPSGSSSEAR
QQIKFGVMERLTPHLKQMLADGREWIICGDINIAHRNIDIKNWRGNQKNSGFLPEERAWL
DVLFGDIGWVDAFRVVNQEAEQYTWWSNRGQAWARNVGWRIDYQIVSPGLRDTVLGARIH
KDERFSDHAPLIMEYAIDLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaaaatcatcaccctgaacgtgaacggcattcgttcggcctggcgcaagggc
ctggcggactttctggcgcgcgagcaggccgacctggtgtgcctgcaggaaacccgggtc
cagcacccgcaattgaccgaggaaatgcgggcgccgcacctttgccagagctttttccac
catgccacgaagcccggctacagcggtgttgccatatacacccgacgcgccccggaccgg
gtggtcgagggcctgggctggccggacttcgacgccgaggggcgctggttgcaggtcgat
tacgggaagctgagcgtggtgtcgctgtacctgccgtcgggctccagcagcgaggcacgc
cagcagatcaaattcggcgtcatggagcgcctgacgccgcacctgaagcagatgctggcc
gacgggcgcgagtggatcatctgcggcgacatcaacatcgcccaccggaacatcgacatc
aagaactggcgcggcaaccagaaaaactccggcttcctgcccgaggagcgcgcctggctc
gatgtgctgttcggcgacatcggctgggtggacgcgtttcgcgtcgtcaaccaggaggcc
gagcaatacacctggtggtccaaccgcggccaggcctgggccaggaacgtaggctggcgg
atcgactaccagatcgtctcgcccggcctgcgggacacggtgctcggtgcgcgcatccac
aaggacgagcgcttctcggaccatgcgccgctgatcatggagtacgccatcgacctgccc
tga
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