Immundisolibacter cernigliae: PG2T_12480
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Entry
PG2T_12480 CDS
T04454
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gbi
Immundisolibacter cernigliae
Pathway
gbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG2T_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbi03019
]
PG2T_12480
03016 Transfer RNA biogenesis [BR:
gbi03016
]
PG2T_12480
Enzymes [BR:
gbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PG2T_12480
Messenger RNA biogenesis [BR:
gbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PG2T_12480
Transfer RNA biogenesis [BR:
gbi03016
]
Prokaryotic type
tRNA degradation factors
PG2T_12480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
S1_TP0910
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
OB_PDCD11
S1_2
KH_NusA_2nd
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ANX04904
UniProt:
A0A1B1YVR6
LinkDB
All DBs
Position
2606553..2608661
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AA seq
702 aa
AA seq
DB search
MSKAKEVRHVKLIRKEVQFGKHLLTLETGEIAKQAFSVMVRMGDTMVLTAVTASKGVKPG
QDFFPLTVDFVERSYAAGRIPGGFFKREARPSEKAILTSRLIDRAMRPLFPKGFYNEVQV
VPTVLSADDEVDPDILGMIGASAALTLSGLPFQGPVGAARVGYKDGAFILNPSYQETAES
DLNLVVAGTASSVLMVESEAKMLPESVMLDAVMFGHQAMQPVIEAILALAAEAGVQPWPW
TPPQKDEALETAVRAVAEQPLNEAYSIPDKQARQDAVAQVRERVAHLAGENGERANEVQG
LFSSVEKRIVRGRILDAQPRIDGRSTRQVRPITIRTGVLPRTHGSALFTRGETQAIVVTT
LGTERDAQLIDALEGEFRDGFMLHYNFPPYCVGETGRMGATKRREIGHGRLAKRALAAVL
PAKTAFPYTLRIVSEITESNGSSSMATVCGGSLALMDAGVPIKEPVAGIAMGLITDGGRF
AVLSDILGDEDHLGDMDFKVAGTASGVTALQMDIKVLGITGQIMQAALEQAREGRVHILG
EMAKALSAPREQMSDYAPRILTMRIHPDKIRDVIGKGGVTIRGITEQTGATIDIDDDGTV
RIASVDRAAGEEARAMIERITSDIEVGMVYEGRVARLMDFGAFVTILPGRDGLLHISQIS
EERVERVSDKLAEGDVVRVKVLEVDKQGRIRLSMKALNEEAV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccaaggaagtacgccacgtgaaattgatccgcaaggaagtccagttcggc
aagcatctgctgacgcttgaaaccggtgaaatcgccaagcaggcgttctcggtcatggtc
cgcatgggcgacaccatggtgctgacggcggttaccgccagcaagggcgtcaagccgggg
caggacttcttccccctgacggtcgatttcgtcgagcgcagctatgccgccgggcgcatc
ccgggcggctttttcaagcgcgaggcacggccgtccgagaaggccatcctgacctcgcgc
ctgatcgatcgggccatgcggccgctgtttccgaaaggcttctataacgaagtacaggtc
gtgccgaccgtgctgtcggccgacgacgaggtcgacccggacatcctgggcatgatcggc
gcctcggcggcgctgacgctgtccggcctgcccttccaggggccggtgggcgcggcccgc
gtcggttacaaggatggcgccttcatcctgaacccgagctaccaggaaacggccgaatcg
gacctgaacctggtggttgccggcaccgccagcagcgtgctgatggtggagtcggaagca
aagatgctgcccgagtcggtgatgctcgacgccgtcatgttcggtcaccaggccatgcaa
ccggtcatcgaggccattctggccctggccgccgaggccggcgtgcagccgtggccgtgg
acgccgccgcagaaggacgaggcgctcgaaacggccgttcgcgccgtggccgaacagccg
ctgaacgaagcctattcgattcccgacaagcaggcgcgccaggacgcggtggcgcaggtc
cgcgagcgggttgctcatctggccggtgagaacggcgagcgggccaacgaggtgcagggg
ctgttctcgtcggtcgagaagcgcatcgtgcgtgggcgcatcctggatgcccagccgcgc
atcgacggtcgctccacccgtcaggtgcgcccgatcaccatccgcaccggcgtgctgccg
cgcacccacggctcggcgctgttcacccgtggcgaaacgcaggcgatcgtggtcaccacg
ctgggcaccgagcgcgacgcgcagctgatcgacgcgctggaaggcgagttccgcgacggc
ttcatgctgcactacaacttcccgccgtactgcgtgggcgaaaccggccgcatgggtgcc
accaagcggcgcgaaatcggtcatggtcggcttgccaagcgcgccctggcggcagtgttg
cccgccaagacggcgttcccgtacacgctgcgcatcgtgtcggagatcaccgagtcgaac
gggtcgagttccatggccaccgtatgcggcggcagtctggcgctgatggatgccggtgtg
ccgatcaaggagccggtggcgggcatcgccatgggcctgatcaccgacggcggccgcttt
gcggtgctgtccgacatcctgggtgacgaggatcacctgggcgacatggacttcaaggtg
gccggcactgccagcggcgtgaccgccctgcagatggacatcaaggtgctgggcatcacc
ggccagatcatgcaggcggcgctggagcaggcgcgcgagggtcgcgtgcacatcctgggc
gagatggccaaggccttgtccgcgccgcgcgagcagatgtcggactacgcgccgcgcatc
ctgaccatgcgtatccatccggacaagattcgtgacgtcatcggcaagggcggcgtgacc
atccgcggcatcaccgagcagaccggcgccaccatcgacatcgatgacgatggcaccgtg
cgcatcgcctccgtggaccgggccgccggcgaggaagcgcgtgccatgatcgaacgcatc
acctccgacatcgaggtcggcatggtctacgagggccgcgtggcgcgccttatggacttc
ggtgccttcgtcaccatcctgcccggccgcgatggcctgctgcacatctcgcagatttcc
gaggagcgggtggagcgggtcagcgacaagctggccgagggcgatgtggtgcgcgtcaag
gtgctggaagtcgacaagcagggccgcatccgcctgagcatgaaggcgctgaacgaagaa
gccgtctga
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