Immundisolibacter cernigliae: PG2T_13485
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Entry
PG2T_13485 CDS
T04454
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gbi
Immundisolibacter cernigliae
Pathway
gbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG2T_13485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbi03019
]
PG2T_13485
03400 DNA repair and recombination proteins [BR:
gbi03400
]
PG2T_13485
Enzymes [BR:
gbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG2T_13485
Messenger RNA biogenesis [BR:
gbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PG2T_13485
DNA repair and recombination proteins [BR:
gbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG2T_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
BTRD1
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANX05088
UniProt:
A0A1B1YWJ2
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All DBs
Position
2848047..2849855
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AA seq
602 aa
AA seq
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MSTALEILGTVFGYHAFRGQQAAIIDRVVAGGDALVIMPTGGGKSLCYQVPALVRPGVGV
VVSPLIALMDDQVAALRELGVAAAALHSGLPSGEAAQAERDLAAGRLDLVYMAPERLLGE
RTLELLQGARPALIAIDEAHCVSQWGHDFRPEYLGLGALGARFPGVPRLALTATADGPTQ
RDIVQRLGLQGAAVFTASFDRPNIRYHIQHGDQMRDRLLDFLDSRHRTDTGIVYCPTRRR
VEETAAWLDKHGRVAVAYHAGMPAEQRAANQRRFLREDGLVMVATVAFGMGIDKPDVRFV
AHLGLPKNIESYYQETGRAGRDGLPANAWMGYGLSDVVGIRQLLASADVPDERRRVELGK
FEALLGLAEITDCRRQALLAYFGEQMAEPCGNCDNCLAPPATFDATVPAQLALSCIYRTG
QRFGVGYLIDVLRGGDDPRIASLGHDRLAVYGRGKERPATQWRAIYRQLVARGYASVDID
GHGGLRLTEQARPLLRGEQALRLREEATAAERNRQKRATGGQSAVPAADQALFEALRAER
RRLAAEHGVPAYVIFHDATLAQMAAERPQTLGQLAQIGGVGAAKLERYGADFLAVLRAAG
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccctcgaaatcctcggcacggtcttcggctaccacgccttccgtggccag
caggcggccatcatcgaccgcgtggtcgccgggggcgatgccctggtcatcatgccgacc
ggcggcggcaagtcgctgtgttatcaggtaccggcgctggtgcggccgggtgtcggcgtg
gtggtgtcgccgctgatcgcgctgatggatgatcaggtggcggcgctgcgggaactgggc
gtggccgcggcggcgctgcattcgggcttgccgtcgggcgaggcggcgcaggcggagcgc
gatctggccgccggacggctggacctggtctacatggcgcccgagcggctgctcggcgag
cgcacgctggagctgttgcaaggcgcgcgaccggcattgatcgccatcgacgaggcgcac
tgcgtgtcgcagtggggccacgatttccggcccgaataccttggccttggcgcgctgggt
gcgcgctttcccggcgtgccgcggctggcgttgacggcgaccgccgacgggcccacgcaa
cgcgacatcgtccagcggctgggcttgcagggtgcagcggtattcaccgccagtttcgac
cggccgaacatccgctatcacatccagcatggcgaccagatgcgcgaccggctgctggat
ttcctggacagccgccaccgcaccgacaccggcatcgtctactgcccgacccggcgccgg
gtggaggaaaccgccgcctggctggacaagcacggccgggtggcagtggcttaccacgcc
ggaatgccggccgagcagcgggctgccaatcagcgccgttttctgcgcgaagacgggctg
gtgatggtggccacggtggccttcggcatgggcatcgacaagccggacgtgcgcttcgtg
gcgcaccttggactgcccaagaacatcgaaagctattaccaggaaaccggccgcgccggc
cgcgacggcctgccggctaacgcctggatgggctatggcctgtcggatgtggtcggcatc
cgccagctgctggccagcgccgatgtgcccgacgagcggcgccgggtcgaactgggcaag
ttcgaagccctgctgggcctggccgagatcaccgactgccggcgccaggcgttgctggcc
tatttcggtgagcagatggccgagccctgcggcaattgcgacaactgcctggccccgccg
gccaccttcgatgccacggtgccggcccagctggccctgtcctgcatttaccgcaccggg
cagcggttcggggtcgggtatctgatcgatgtgctgcgcggcggggacgatccgcgcatt
gccagccttggccacgaccggctggcggtgtacgggcgcggcaaggagcgtccggcgacg
cagtggcgggccatttataggcaactggtggcgcgcggttacgcgagcgtggacatcgac
ggtcacggcggtctgcgtctgaccgagcaggcgcgcccgctgctgcgtggcgagcaggcc
ctgcgtctgcgcgaggaggcgacggccgccgagcgaaaccgccagaagcgcgccaccggc
ggccagtcagcggtgccggcggccgatcaggcgctgttcgaggccctgcgggccgagcgg
agacgcctggccgcggagcatggtgtgccggcctatgtgatctttcacgacgcaacgctg
gcacagatggcggccgagcggccgcagacgctgggccaactggcgcagatcggcggcgtg
ggcgcggccaagctggagcgttatggagcggactttctggccgtgctgcgcgcggcggga
gaagcctag
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