Citrifermentans bemidjiense: Gbem_0005
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Entry
Gbem_0005 CDS
T00749
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_0005 (gyrA)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_0005 (gyrA)
Enzymes [BR:
gbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Gbem_0005 (gyrA)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Topoisomerases
Gbem_0005 (gyrA)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gbem_0005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
PemK_toxin
Motif
Other DBs
NCBI-ProteinID:
ACH37038
UniProt:
B5E7Q2
LinkDB
All DBs
Position
6866..9376
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AA seq
836 aa
AA seq
DB search
MLNQLNKVSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLFAMYDMSNDWNK
PYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAMR
YTEIRMEQLAHELLADIDKETVPYGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMATN
IPPHNLSEVIDGIVAIIDNPQLTFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGIIQ
MRAKVQIETQKKTERQSIVVTEIPYQVNKARLVEKIAELVKEKKIEGISDLRDESDREGM
RVVIELKKDENPTIILNHLYKQTQMQSSFGIIMLAIVNSRPRVLTLRETIDFFIEHRKEI
VTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKAGLMERFGLSDLQA
QAILDMRLHRLTGLEREKIMEELREILKYIARLKEILASEAEILKIIVGELVELKDKFGD
KRRSEIVMQTADISLEDTIVEEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEE
DFVEQLFIASTKDYLMFFTDAGKVYWLKVYEIPEAGRAARGKAIVNLLNLAANEKITTIL
PVKEFVDDKFIMMATRNGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLITVALTDGKQDVL
LASANGKAIRFKEEDVRTVGRVSRGVRGMTLEGEDVVIGMEILNENFTDSTIFTVTENGY
GKRTEISEYRSQSRGGKGVITIKTTERNGNVVDIKQVNDDNDLMLITDQGKILRVPVAGF
SIIGRNTQGVRLMVKEENERVVAVARLAEKEEQDESEDGELDEMVELESGEEQGEE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaactcaacaaggtatcggtaaacatcgaagacgagatgaaacgctcctac
atggactacgccatgtccgtgatcgtggggcgcgctcttccggacgtgcgcgacggactg
aagccggtacacaggcgctgcctgttcgccatgtacgacatgagcaacgactggaacaag
ccgtacaagaaatcggcccgcgtggtcggcgacgtcatcggtaagtaccacccgcacggc
gacaccgccgtgtacgacaccctggtcaggatggcccaggacttctcgctgcgctacccg
ctggtcgacggccaggggaacttcggctccatcgacggcgactcccctgcggctatgcgt
tacaccgagatcaggatggagcagctggcccacgagcttttggccgacatcgacaaggaa
acggtcccctacggccccaactacgacgactcgctgaaagaaccgctggtactcccctcc
aagttcccgaacctcttggtgaacggctccgccggcatcgcggtcggcatggccaccaac
atcccgccgcacaacctctccgaagtgatcgacggcatcgtggccatcatcgataacccg
cagcttaccttcgaggagctggtggaactgatcccgggtccggattttccgaccggcggc
ttcatctacggccgcgaagggatcatgaaggcctactcgaccggccgcggcatcatccag
atgcgcgccaaggtgcagatcgagacccagaaaaagaccgagcgccagtccatcgtggtc
acggaaatcccgtaccaggtgaacaaggcgaggctggtcgagaagatagccgagctggtc
aaggagaagaagatcgaggggatctcggacttaagggacgagagcgaccgcgagggtatg
cgcgtcgtcatcgaactgaagaaggacgaaaacccgaccatcatcctgaaccacctctac
aagcagacccagatgcagtcctccttcggcatcatcatgctggccatcgtcaacagccgg
ccgcgcgttttgacgctcagggagaccatcgacttcttcatcgagcacagaaaggagatc
gtcacccgccgcaccatcttcgacctgaagaaggcagaggcgagggcccatatcctggaa
ggcttgaagatagcgctggacaacctggacgaggtgatcgcgctgatcaaggcgagcgcc
tccccggccgaggcgaaggcggggctcatggagcgcttcgggctctccgaccttcaggcc
caggcgatcctcgacatgaggctgcaccgcttaaccggcctcgagcgcgagaagatcatg
gaggaactgcgcgagattctgaagtacatcgccaggttgaaagagatcctcgcctccgag
gcggagatcctcaagatcatcgtcggggaactggtcgagctcaaagacaagttcggcgac
aagcgccgctccgaaatagtgatgcagactgcggacatctccttggaggacaccatcgtc
gaggaagacatggtggtcaccatctcgcacacgggctacatcaagcgcaacgccgtcacc
ctctaccgcgcccagcgccgcggcggcaagggcaagaccggcatgaagaccaaggaagag
gatttcgtcgagcagcttttcatcgcctccaccaaggattatctgatgttcttcaccgat
gccgggaaggtctactggctcaaggtgtacgagatcccggaggcggggcgcgcggcgcgc
ggcaaggcgatcgtgaacctcttgaacctggcggcgaacgagaagatcaccaccatactc
ccggtcaaggagttcgtggacgacaagttcatcatgatggcgaccagaaacggcgtggtg
aagaagaccaacatgatggagtactcgcacccgagggtaggcggcatcatcgccgtgaac
ctcgacgaaggggacaagctgatcaccgtggcgctcaccgacggcaagcaggacgtgctg
ctcgcctccgccaacggcaaggcgatccgcttcaaggaagaggacgtccgcaccgtggga
cgcgtctcgcgcggggtgcgcggcatgacgctggagggcgaggacgtggtgatcggcatg
gagatcctcaacgagaacttcaccgactccaccatcttcaccgtgaccgagaacggctat
ggcaagcggaccgagatcagcgagtaccgcagccagtcgcgcggcggcaagggggtcatc
accatcaagaccaccgagagaaacggcaacgtggtcgacatcaagcaggtcaacgacgat
aacgacctgatgctcatcacggaccagggaaagatcctgcgcgttcccgtcgccggcttc
tccatcatcgggcgcaacacccagggggtgcgcctcatggtgaaagaggagaacgagagg
gtggtcgccgtggcccggctcgccgagaaagaggagcaggacgagtcggaagacggcgaa
ctcgacgagatggtggaactggaatcgggcgaggagcagggcgaagaataa
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