Citrifermentans bemidjiense: Gbem_0030
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Entry
Gbem_0030 CDS
T00749
Symbol
hdrA
Name
(GenBank) heterodisulfide oxidoreductase, FAD-binding and iron-sulfur cluster-binding subunit A
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00680
Methane metabolism
gbm01100
Metabolic pathways
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Gbem_0030 (hdrA)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
Gbem_0030 (hdrA)
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
Gbem_0030 (hdrA)
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
Gbem_0030 (hdrA)
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Gbem_0030 (hdrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_6
Fer4
Fer4_7
Pyr_redox_2
Fer4_10
FAD_oxidored
Fer4_16
FAD_binding_2
Fer4_2
NAD_binding_8
GIDA
DAO
Fer4_21
Fer4_8
Fer4_9
Fer4_22
Pyr_redox
AlaDh_PNT_C
Pyr_redox_3
Amino_oxidase
HI0933_like
Fer4_17
Thi4
Fer4_3
FAD_binding_3
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ACH37061
UniProt:
B5EJ35
LinkDB
All DBs
Position
complement(35773..37770)
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AA seq
665 aa
AA seq
DB search
MSRIGVFVCHCGENISRTVDVEQVARAAGKISGVAYACDYKYMCSDPGQNLLKKAVSEHK
LDGVVVAACSPRMHEKTFRKAASAAGLNPYLCDMANIREHCSWVHEDKKLATSKASDIVK
LMVERVKKGKSLAPITVPVTKRALVIGGGIAGIQAALDIADAGHQVVLVEREPSIGGHMA
QLSETFPTLDCSQCIMTPKMVDVANHPNITLHTFSEVEKVEGYIGNFQVTLKHKARSVNE
SKCTGCGICMTKCPKKKIPNEFDQGHGLRTAIYVPFPQAVPNTPVIDRENCTMFQSGKCG
VCAKVCGPGAVDYQQEDRFSVEAVGAVVVATGFKLYSIDRKPEDSPIQGYGEFGYGAIPD
VIDGMTFERLASASGPTGGKILRPSDGKEPKQVVFIQCVGSRAREKGISYCSKVCCMYTA
KHTMLYHHKVHDGQAYVFFMDARTPGKGYDEFWRRAVEEEEAVYIRGMVSRLYQKGEKIV
VMGSDIQVGVQVEIEADLVVLATAVQAQDGADQLAQKLGISYDKYNFYSEAHAKLKPVEC
ATAGIYLAGACQGPKDIPDTVSQASAAAAKVMTLFSKDQLERDPVVAKVNEKYCVGCLAC
KKVCPYGAVEEKEIRDRQGNLVKVVAYVNPGVCGGCGTCQATCPSKSVELDGYTDEQIMA
MIESL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaatcggtgtttttgtgtgccactgcggcgagaatatctcccgtaccgtggat
gtggagcaggtggcccgagccgccgggaagatctccggcgtagcttacgcctgcgattac
aagtacatgtgttccgacccggggcagaaccttttgaagaaggccgtatccgagcacaag
ctagacggcgtggtggtggcggcgtgcagccctcgcatgcacgagaagaccttcaggaaa
gcggcatcggccgcgggtctcaacccgtacctctgcgacatggccaacatccgcgagcac
tgctcctgggtccacgaggacaagaaacttgcgacgtcgaaggccagcgacatcgtgaag
ctcatggtggagcgggtcaagaagggtaagtcgctcgcgcccattaccgtgccggtcacc
aagcgggcgcttgtcatcggcggggggatcgcgggaatccaggcagcgctcgacatcgcc
gacgcggggcaccaggtggtgctggtcgagcgcgagccctccatcggcgggcacatggcg
cagctctccgagaccttcccgacgcttgactgctcccagtgcatcatgaccccgaagatg
gtcgacgtcgccaaccacccgaacatcaccctgcacaccttttccgaggtcgagaaggtc
gaggggtacatcggcaacttccaggtcacgctgaagcacaaggcgcgctcggtgaatgag
tcgaagtgcaccggctgcggcatctgcatgaccaagtgcccgaagaagaagatccccaac
gagttcgaccaggggcacgggctgcgcaccgccatctacgtccccttcccgcaggcggta
ccgaacaccccggtcatcgaccgcgagaactgcaccatgttccaaagcggcaagtgcggc
gtctgcgccaaggtctgtgggccgggagcggtggactaccagcaggaggatcgtttctcc
gtcgaagccgtgggcgccgtcgtggtcgccaccggattcaagctctactccatagacaga
aagcctgaggacagcccgatccaggggtacggcgagttcggctacggcgccatccccgac
gtcatcgacggcatgaccttcgaacggctcgcctccgcctcaggtcctaccggcggcaag
atcctgaggccgtccgacggcaaggaaccgaagcaggtggtattcatccagtgcgtcggc
tcccgcgccagggagaaagggatctcctactgctccaaggtctgctgcatgtacaccgcg
aagcacaccatgctctaccaccacaaggtgcacgacggccaggcatacgtcttcttcatg
gacgcgaggaccccggggaaggggtacgacgagttctggaggcgcgccgtcgaggaagag
gaggcggtctacatcagggggatggtctcccgcctgtaccagaagggcgagaagatcgtg
gtgatggggagcgatattcaagtcggcgtgcaggtggagatcgaagccgacctggtggtc
ctggccaccgcggtgcaggcccaggacggagccgaccagctggcacagaagctgggcatc
tcctacgacaagtacaacttctactccgaggcccacgcgaagctgaagcccgtcgagtgc
gctaccgccgggatctatctggccggggcctgccaggggccgaaggatatcccggacacg
gtgtcccaggcttccgccgccgcggccaaggtgatgacactcttctccaaggaccagttg
gagcgcgacccggtggtcgccaaagtcaacgagaaatactgcgtcggctgtcttgcctgc
aagaaggtctgcccctacggcgccgtcgaggagaaggaaatcagggaccgccaggggaat
ctggtcaaggtagtggcctacgtgaaccccggcgtctgcggcggctgcggcacctgccag
gccacctgtccgtccaagagcgtcgagctcgacggctacaccgacgagcagatcatggcg
atgatcgaatcgctttaa
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