Citrifermentans bemidjiense: Gbem_0076
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Entry
Gbem_0076 CDS
T00749
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm03420
Nucleotide excision repair
gbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gbem_0076 (pcrA)
03430 Mismatch repair
Gbem_0076 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_0076 (pcrA)
Enzymes [BR:
gbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gbem_0076 (pcrA)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gbem_0076 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Gbem_0076 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACH37107
UniProt:
B5E8C4
LinkDB
All DBs
Position
90435..92633
Genome browser
AA seq
732 aa
AA seq
DB search
MKLLHNLNPPQKEAVLHGEGPLLVLAGAGSGKTRVIVHRIAYLIHERGVPAWQILGVTFT
NKAAGEMRERLAHMLGDGELPLISTFHSTCARILRSEIRHLGYDSNFAIYDDRDCEKLLK
DCAAELNLDEKRYPAKALAGALDEFKNQGLAPDDVPTDSPYQATLARVYRCYQERLKRCN
AVDFGDLLLLAVQLLEQVKEVRDKYLQRYRWIMVDEYQDTNPVQYRLVQLLAGERKNLCV
VGDDDQSIYGWRGADIRNILEFEKDFPGVKVVKLEQNYRSTKTILDGAWNVVQKNRGRKP
KRLWTDNPDGERIVYRTLPNEWEEARTVCRETERFLDEGGDLSEVAVFYRTNAQSRAVED
AMVSAGVAYHMVGGVRFYARLEVKDILAYLKVLDNPSDDVALKRIINTPPRGIGNTTVQR
LSEFAAEKGIPLYDAMLEGAFGPLLSVAAKGKVAAFAQEIDGYKEKAEQMPLSELTSTII
YESGYFARLKALGSDEAQERIENLQELVTAMQAYESGPGEKGLADFLEQVALVSDLEQEG
DGKKSSATLMTLHSAKGLEFPLVFIIGMEERLFPHVRALEDPAQMEEERRLCYVGMTRAK
KRLFLLNVRRRHIFGQEQMNPPARFIADIPRELLDSGENWQEPARHREFPSHNLASLFEE
EMEPEEDDNEVRMVPEHDEGIYLGMKVRHAQFGPGTIRKIEGEGDNQKVIVWFNSLGGPK
KLLVRFAGLERA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctccacaatctgaaccctccccaaaaagaggccgtgctccacggggaagga
ccgcttttggtcctcgccggggccggctccggcaagacccgcgtcatcgtgcaccgcatc
gcctacctgatccacgaacgcggggtccccgcctggcagatcctgggcgtgacctttacc
aacaaggcagcgggcgagatgcgtgagcgcctggcgcacatgctgggtgacggggaactt
ccgcttatctccaccttccactccacctgcgccaggatcctcagaagcgagatccgccac
ctgggatacgacagcaacttcgccatctatgacgacagggactgcgaaaagctcctgaag
gattgcgccgccgagctgaacctggacgagaagagatacccggccaaggcgctcgccggt
gctctggacgagttcaagaaccaggggctcgcgccggacgacgtccccacggactccccc
taccaggccacgctggcccgggtctaccgctgctaccaggaacgcctcaagcgctgcaac
gcggtcgatttcggcgacctgctgctccttgccgtgcagctgctcgaacaggtcaaagag
gtgcgggacaaatacctgcagcgctaccgctggatcatggtggacgaatatcaggacacg
aacccggtgcagtaccgcctggtgcagcttctggccggggagcggaagaacctctgcgtg
gtcggggacgacgaccagtccatctacggctggcgcggcgcggatattcggaacatcctg
gaattcgagaaggatttcccgggggtgaaggtggtgaagctggagcagaactaccgctcc
accaagaccatcctggacggcgcctggaacgtggtgcagaaaaaccgcggccgcaagccc
aagcgcctttggaccgacaaccccgacggcgagcgcatcgtctaccgcaccctccccaac
gaatgggaggaggccaggaccgtctgccgcgagacggagcgcttcctcgacgaggggggg
gacctctcggaggtggccgtcttctaccgcaccaacgcgcagtcccgcgccgtcgaggac
gccatggtgtcggcaggtgtcgcctaccatatggtgggcggggtccgcttctacgcgagg
cttgaggtgaaggacatcctcgcctacctgaaggtgctggacaacccctccgacgacgtg
gcgctgaagcggatcatcaacacgccgccgcgcggcatcggcaacacgacggtgcagcgt
ctctccgagttcgccgcggaaaaggggataccgctttacgacgccatgcttgagggggcc
ttcgggccgctcctctccgtggctgccaagggaaaggtcgccgctttcgcgcaggagatc
gacggctacaaggagaaggcggagcagatgccgctttccgaactcacctccaccatcatc
tacgagtccgggtatttcgcccggcttaaggcgctgggaagcgacgaggcccaggagcgg
atcgagaacctccaggagctggtgacggccatgcaggcctacgagagcggccccggcgag
aagggattggcagacttcctggagcaggtggcgctggtaagcgacctggagcaggagggt
gacgggaagaaatcttcggcgacgctgatgacgctgcactccgcgaaggggctggagttc
ccgctggtgttcatcatcggcatggaggagcggcttttcccccacgtgagggccctggaa
gatccggcccagatggaggaggagcgcaggctctgctacgtggggatgacccgcgccaag
aagcgccttttcctgctgaacgtgcgccggcgccacatcttcggccaggagcagatgaac
ccgccggcaaggttcatagccgacataccgcgagagctcctcgacagcggggaaaactgg
caggagcctgcgcgacaccgcgagttcccctcccacaacttagcctcgctcttcgaggag
gagatggagcccgaagaggatgacaacgaggtgcgcatggtgccggagcacgacgagggt
atctacctcggcatgaaggtgcgccacgcccagttcggccccggaaccatccgcaaaatc
gaaggggagggtgacaaccagaaggtgatcgtctggttcaactcgctgggagggccaaag
aagctcctggtccgcttcgcggggcttgagcgggcgtga
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