KEGG   Citrifermentans bemidjiense: Gbem_0108
Entry
Gbem_0108         CDS       T00749                                 
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Gbem_0108 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gbm01007]
    Gbem_0108 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gbm03016]
    Gbem_0108 (serS)
Enzymes [BR:gbm01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     Gbem_0108 (serS)
Amino acid related enzymes [BR:gbm01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   Gbem_0108 (serS)
Transfer RNA biogenesis [BR:gbm03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Gbem_0108 (serS)
 Prokaryotic type
    Gbem_0108 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N V-SNARE Mod_r Cauli_AT DUF1664 Baculo_PEP_C Pup_ligase TMEM100 PCRF dATP-dGTP_PPHyd DUF2203 SR_plectin_7 FapA
Other DBs
NCBI-ProteinID: ACH37139
UniProt: B5E8F6
LinkDB
Position
130066..131334
AA seq 422 aa
MLDARYIRENLETVEARLKTRGEGVDIALFKELDGRRRELLQQSETLKALRNKVTEEIAR
LQDKSQAAERKTEMREVSQQIKGIDESLRSVEEELQNFLLTVPNVPNETTPIGKSEEDNV
VVRTWGEVPTLSFEPKPHWEIGEGLGILDFERGAKLAGARFTLYRGAGARLERALINYML
DLHTDEHKYIEMLPPFMVNRECMTGTGQLPKFEEDLFHMEGVDFFLIPTAEVPVTNIHRG
EILKGSDLPISYVAYTPCFRKEAGSYGKDTRGLIRQHQFNKVELVKFTSPEDSYQQLQKL
LGHAEEVLRRLQIPYRVVELCTGDIGFSAAKTFDIEVWLPGQNCYREISSCSCFEDFQAR
RAGIRFRPEEKAKPEFVHTLNGSGLAVGRTLVAVLENYQQADGSVLIPEVLRPYMGGAER
IS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgctcgacgcgagatacatacgcgaaaacctggaaactgtagaggcgcggctcaaaacc
agaggcgaaggcgttgatattgcgctcttcaaggaactggacggccgtcgtcgcgaactt
ctgcagcaaagcgagaccctcaaggcactgcgcaacaaggtgaccgaagagatcgcgcga
ctgcaggacaagagccaggcggcggagcgcaagaccgagatgcgcgaggtctcgcaacag
atcaaggggatcgacgagtcgctcaggagcgtcgaagaggaactgcagaacttcctgctc
accgttcccaacgtacccaatgagaccaccccgataggtaagtccgaagaggacaacgtc
gtggtgcggacttggggcgaggtcccgacgctttccttcgagccgaaaccgcactgggag
atcggcgagggactcggcatcctcgacttcgagcgcggcgccaagctcgccggagcacgc
ttcaccctctaccgtggggctggagcgaggctcgaacgcgctctcattaattacatgctg
gatctgcatactgacgagcataaatatattgaaatgctcccgccctttatggtaaacagg
gaatgcatgaccgggaccgggcagctgcccaagtttgaggaagatctcttccatatggaa
ggggtcgatttttttctcatccccacggctgaagtaccggtaaccaacatacaccgcggc
gagatcctgaagggttccgatctcccgatttcttatgttgcctacacgccctgcttccgc
aaggaggctggttcttacggcaaggacacgcgtgggctgatcaggcagcaccagttcaac
aaggtggaactggtcaagttcacctcccccgaggattcctaccagcaattgcagaagctg
cttggccacgccgaggaagtgctgcgcaggttgcagataccttaccgggtggtggagctt
tgcaccggcgacataggtttttccgccgccaagaccttcgatatcgaggtctggctgccg
ggacagaactgctaccgggagatttcctcctgcagctgcttcgaagatttccaggcccgt
cgcgccgggattcggttccgcccggaagagaaggccaagcccgagttcgtgcacacgctg
aacggctccggcctcgccgtcggcaggaccctggtggcggtgctggaaaactaccagcag
gcagacggctcggtgctgatccccgaggtgctcaggccttacatgggcggggcagagaga
atcagctag

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