Citrifermentans bemidjiense: Gbem_0111
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Entry
Gbem_0111 CDS
T00749
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbm02000
]
Gbem_0111
Transporters [BR:
gbm02000
]
Other transporters
Pores ion channels [TC:
1
]
Gbem_0111
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Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACH37142
UniProt:
B5E8F9
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Position
133141..135186
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AA seq
681 aa
AA seq
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MGTCISRLVTGIFLLTTLGAPLAFAQQEGEGAAAPALGEMDLEQLTNLKVEQVYGVSKFE
QAVTEAPASVSVITADEIKHYGWRTLADVIRSSRGFFTSYDRNYSYIGTRGFSRPGDYNT
RVLLLIDGHRINDAIYETAAIGTEFILDLALIDRIEIIRGPSSSLYGAGAFFGVINVITR
SAKQIEGGEAAASGGSQRTGAGRLTYGKSFDGGEFVASGSAYKSRGNDSLFYPEFNDPAT
NNGIASNMDRDRNYSLFASGRLHDFTLTGALISRDKRIPTASFNTIFNDPRTHSVDRRSY
LDLKYDKALEGGTGVTARLFYDEYRYQGNFAYEKGLDDPGFYPPTYLNRDDHLARWWGGE
AQASRQVLPRLQLTAGASFRDSFLKLPNYDAVPQGRRVENDHSDLFLALFGQGELRLFEH
LIVNVGVRHDHYQTFGGATSPRLAVIYTPVEGTVFKYIEGKAFRAPNAYELYYNDVFDTN
VANPRLAPETVRTRELIYEQYLGEVLRTSLSLFQNKIENLISYQNLPSGEVSFGNAGRVK
AVGGEFEVEGQWASGFAARTSYSFVSARDEGQDQRLDYSPRQLAKLNLTAPLYRKKLFAG
VELQGTARRDFSHNGVQTAAPGYLIANATLFSTGILPSLDLSLSVYNFLDRRYQDPATTD
HRQSLIAQDGRTFRVQATYGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggtacctgcatctcccgccttgttacggggatctttcttctgaccacgctgggcgct
cccctggcctttgcgcagcaggagggggagggagccgccgccccggcgctgggggaaatg
gacctggaacagttgaccaacctcaaggtggagcaggtgtacggggtctcgaagttcgaa
caggcggtaacggaggctcctgcctcggtctcggtgatcaccgccgacgagatcaagcac
tatgggtggcgtacccttgccgacgtgatcaggtcgagccgcgggttcttcacgagctat
gaccgcaactacagctacatcgggacgcggggcttcagccgccccggggactacaacacc
cgcgtgctccttctgatcgacgggcaccggatcaacgacgccatctacgagaccgccgcg
atcggaaccgagttcatactcgatctggcgctcatcgacaggatcgagatcatccgcggg
cccagttcctcgctttacggtgcgggcgccttcttcggggtgatcaacgtcatcacccgc
agcgccaaacagatcgaggggggggaggcggcggcctcggggggaagccagcggaccgga
gccgggcgcctgacctacgggaagagtttcgacggcggagagttcgtcgcctccgggtcg
gcctacaaaagccgcggcaacgactcgctcttctaccccgagttcaacgaccccgccacc
aacaacggcatcgcaagcaacatggaccgggaccggaattattccctgttcgcttccggg
cgcctgcacgacttcaccctgaccggggcgctgatttcccgggataaacggatccccacc
gcttcgttcaacaccatcttcaacgacccacggacccattccgtcgaccggcgcagctac
ctcgacctcaagtacgacaaggcgttggaaggggggaccggcgtcaccgccaggctcttc
tacgacgagtaccgctaccaggggaatttcgcctacgaaaaaggcctggacgaccccggt
ttctacccgcccacctacctgaaccgggacgatcatctggcgcgctggtgggggggggag
gcccaggcgagccgccaggtcctgccgcgcctgcagcttaccgccggcgccagcttccgg
gacagcttcctaaagcttcccaactacgacgcagtgccacaggggcgcagagtggagaac
gaccacagcgacctcttcttggccctgttcgggcagggggagctgcgccttttcgagcac
ctgatcgtcaacgtcggggtccgccacgaccactaccagaccttcggcggcgcgaccagc
ccgcgcctggcggtcatctacacgccggtcgaagggaccgtcttcaagtacatcgaggga
aaggcgtttcgcgcccccaacgcctacgagctctactacaacgacgtcttcgacaccaac
gtcgccaatccgcgcctggcgcccgagacggtcaggaccagggagctgatctacgagcag
tacctgggcgaggtgcttagaaccagcctgagcctgttccagaacaagatagagaacctg
atcagttaccagaaccttccttcaggagaggtatccttcggcaacgccggccgggtgaag
gcggtgggaggggagttcgaggtagaggggcagtgggcaagcggcttcgcggcgaggacc
agctacagcttcgtctcggcccgcgacgaggggcaggaccagcggctggactactcgccg
cgtcaactggccaagctgaacctgaccgcgccgctttaccgcaagaagcttttcgctggg
gtggaactgcaggggacggcccgccgcgacttctcccataacggcgtgcagaccgcggcg
ccgggatacctgatcgccaacgccaccctgttctccaccgggatactcccgtcgctggac
ctctctttatccgtctacaacttcctggaccggcgctaccaggacccggccacgaccgac
cacaggcagagcctgattgcgcaggacggccggaccttcagggtccaggccacctacggt
ttctga
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