Citrifermentans bemidjiense: Gbem_0188
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Entry
Gbem_0188 CDS
T00749
Symbol
hup-1
Name
(GenBank) histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_0188 (hup-1)
03036 Chromosome and associated proteins [BR:
gbm03036
]
Gbem_0188 (hup-1)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_0188 (hup-1)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Gbem_0188 (hup-1)
Chromosome and associated proteins [BR:
gbm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Gbem_0188 (hup-1)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Gbem_0188 (hup-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
GTP_EFTU_D2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ACH37219
UniProt:
B5E982
LinkDB
All DBs
Position
complement(220647..220931)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKAELVEAVAKSANIPKGAAEKAVGAFISSVSGALKKGDRVTLVGFGSFEVASRQARTG
RNPQTGKEIKIAEAKVPKFRPGKALKDAIAAKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaactggtcgaagcagtggcaaagtccgcaaacatccccaaaggcgca
gctgagaaggccgtcggtgcattcatctccagcgtcagcggcgcattgaagaagggagac
agggtaaccctggtcggcttcggcagcttcgaagtggcctcgcgtcaggcccgtaccggc
aggaacccgcagaccggcaaggaaatcaagattgccgaagccaaggtgcccaaattccgc
cccggcaaggctctcaaagacgccatcgccgccaagaagaagtag
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