Citrifermentans bemidjiense: Gbem_0212
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Entry
Gbem_0212 CDS
T00749
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm03030
DNA replication
gbm03430
Mismatch repair
gbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbem_0212 (dnaX)
03430 Mismatch repair
Gbem_0212 (dnaX)
03440 Homologous recombination
Gbem_0212 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_0212 (dnaX)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_0212 (dnaX)
Enzymes [BR:
gbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gbem_0212 (dnaX)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gbem_0212 (dnaX)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gbem_0212 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_30
AAA_14
AAA_16
PIF1
RCF1-5-like_lid
ResIII
Mg_chelatase
DUF815
Glyco_tranf_2_5
AAA_19
DUF3646
AAA_18
nSTAND3
AAA_24
DEAD
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACH37243
UniProt:
B5E9U5
LinkDB
All DBs
Position
complement(249166..250914)
Genome browser
AA seq
582 aa
AA seq
DB search
MSYLVLARKWRPQTFSDLVGQEHVSQTLKNAIDGGRVAHAFLFTGARGVGKTSSARILAK
ALNCESGLTVEPCNTCSTCLEITEGNSVDVFEIDGASNTGVDDIRELRDNIKYLPSRSRY
KIFIIDEVHMLTTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFKRIAL
PRIVSRLRYIVDQEGVQVSDEALAVVARKGDGSMRDSLSTLDQVLAFCGNQVADADVAAL
LGVVDRRLIMDGCRAVLSKEVREALQIVAQVDSFGYSMRQFCRELIDQFRNVAILKAVGE
PGDLLELSEAELGELRTLADAATGTDLQRHLTLLLKAEAEMAHASFPRLVLEMTMMKMAT
LAPAVAVQELLSRLDSLESGAPAGPRPARQEGAPRAAAPPVQAPPAARDQHAARPAAPPS
APAPQPPPAPPAASAAPAAADAGSGELWGSFVQFVKGKRPMLGTELEQVYPVQVSRQLLE
IGCLNGTFELKRMQDPERVTELKELAKTHFGGTPAVRITVLSEPPKDAPPSLSEKKNLEN
AERQATLRREAEEHPLVAAAVALFDGEIAEVKEIPGKDVIQS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctatctcgtactcgctagaaaatggcgcccccagaccttcagcgatctggtcggc
caggagcatgtcagtcagaccctgaaaaacgccatcgacggcgggcgggtcgcgcacgcc
ttcctcttcaccggggcccgcggggtgggaaagaccagctcggcgcgcatcctcgccaag
gcgctcaactgcgagagcgggctgaccgtggagccgtgcaatacctgctccacctgcctg
gagatcaccgaggggaactctgtcgacgtcttcgagatcgacggcgcctccaacaccggc
gtggacgacatcagggagttgcgcgacaacatcaagtacctcccgtcgcgctcgcgctac
aagatcttcatcatcgacgaagtccacatgctcaccaccaacgccttcaacgcgctgttg
aagacgctggaggagccccccccgcacgtcaagttcatcttcgccaccactgaaccccac
aaggtccccatcaccatcctttcgcgctgccagcgtttcgacttcaagaggatcgcgctg
ccgcgcatcgtctccaggctgcgctacatagtggaccaggagggggtgcaggtctcggac
gaggcgcttgccgttgtggccagaaaaggggacgggagcatgcgcgactcgctctccacg
ctggaccaggtgctcgccttctgcggcaaccaggtcgcagacgccgacgtcgcggcactt
ttgggcgtggtggaccgccgcctgatcatggacggctgccgcgccgtgctctcgaaggag
gtgcgcgaggcgctgcagatcgtggcgcaggtggattccttcggttacagcatgaggcag
ttctgccgcgagctgatcgaccagttccgcaacgtggccatcctgaaggcggtcggcgaa
ccgggggacctcttggaactctccgaggcggagcttggcgagttgcgcaccctggcggat
gccgctacggggaccgacctccagcggcacctgacgctgctccttaaggccgaggcggag
atggcgcatgcgagcttcccgcgcctggtgctggaaatgaccatgatgaagatggcgaca
ctggcgcctgcggtcgcggtgcaggaactcctctcccggctggactcgctggaatccgga
gcgcccgcaggtccgcgcccggcccgccaggagggcgcccctcgcgccgccgcgccgccg
gtccaggcgccccccgccgcccgggaccagcacgccgcacgcccggccgcgcccccttcc
gctccggctccccagcccccccctgccccgccggcagcttcagctgcgccggcagccgcc
gacgcagggagcggcgagctttgggggagcttcgtgcagttcgtcaaagggaagcgtccc
atgctcggcaccgagctggagcaggtctacccggtccaggtctcccgccaactgctggag
atcggctgcctgaacgggaccttcgagctgaagaggatgcaggacccggagcgggtgacg
gaactgaaggaactcgccaagacccatttcggcggaaccccggcggtgaggataacggtg
ttgagcgaacccccgaaggacgcgccgccgagcctgtcggaaaaaaaaaaccttgaaaat
gccgagcgacaggcaaccctgaggcgcgaggcggaggagcacccgctggtggccgcggcg
gtggcgctgttcgacggggaaatcgccgaagtgaaggaaatccccggcaaggatgtcata
caatcataa
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