Citrifermentans bemidjiense: Gbem_0245
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Entry
Gbem_0245 CDS
T00749
Name
(GenBank) ribonuclease Z-related hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbm03016
]
Gbem_0245
Enzymes [BR:
gbm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Gbem_0245
Transfer RNA biogenesis [BR:
gbm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Gbem_0245
Prokaryotic type
Gbem_0245
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACH37276
UniProt:
B5E9X8
LinkDB
All DBs
Position
complement(288913..289944)
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AA seq
343 aa
AA seq
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MTPHFLPALVNPPFGDPGLYVDFLFARRAVLFDLGDLAPLPTRKLLRVSDICISHTHIDH
FIGFDLVLRIMLGRDKEVRLYGPSGILRQVEHRLASYSWNLIQSYPTEFVLTVTELHPDG
SAQRASFSSRRIFERENQQELMLPEGVVLDEGNLRIRATFLEHSIPCLAYAFEEKLHVNF
MKNRLAELGLPVGPWLSEVKRAVLRGEPDDTLVYPAAAGEERPASGWTIAKLKEKVLQVV
PGEKIAYVTDTAFTNENRRRIVELARDADYLFIEAVFLHVDSERARDRAHLTARQAGELA
REAGVARVLPFHFSPRHLGAEAELRREVNLAFAASPLQEEESG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcacttcctgccggccctggtgaaccctcccttcggcgaccccggcctctac
gtcgacttcctcttcgcgcgccgggccgtcctcttcgacctgggggacctggcgccgctt
cccacgcgcaagctcttgcgggtgagcgacatctgcatctcgcacacgcacatcgaccac
ttcatcggcttcgaccttgtgctacgcatcatgctgggacgggacaaagaagtgaggctg
tacggtccctcaggcatcctgcggcaggtggagcaccgcctcgcgtcctacagctggaac
ctgattcaaagctatcccaccgagttcgtcctcaccgtcaccgaactccatcccgacggc
agcgcgcaaagggcaagcttcagctcccggcgcatctttgaaagggaaaaccagcaggaa
ctcatgctccccgagggcgtcgtgctggacgaggggaacctgcgcatccgcgccaccttc
ctggagcacagcatcccctgcctcgcctatgctttcgaggaaaagctccacgtaaacttc
atgaagaaccggctggccgagctgggcctgccggtcggcccctggctttccgaagtaaag
cgcgcggtgctcaggggagagccggacgataccctggtctatcccgcggctgcgggcgag
gagcgcccggcttccggctggaccatagcaaagctgaaagaaaaggtgctgcaggtggtg
ccgggggaaaagatcgcctatgtcaccgacaccgccttcaccaatgagaaccgccggcgc
atcgtggagctggcgcgggacgcagactacctcttcatcgaggcggtcttcctgcacgtc
gactctgagcgggcgcgcgaccgtgcgcacctgaccgcccggcaggccggggagctggcc
cgggaggcgggggtggcgagggtcctccccttccacttctcccccaggcatttgggggcc
gaagcggagcttcggcgcgaggttaatctggcgttcgcggcctcccccctccaagaggag
gagagcgggtag
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