Citrifermentans bemidjiense: Gbem_0461
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Entry
Gbem_0461 CDS
T00749
Symbol
bkdF
Name
(GenBank) branched-chain 2-oxoacid dehydrogenase complex, E2 protein, dihydrolipoamide acyltransferase, putative
KO
K00627
pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:
2.3.1.12
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00010
Glycolysis / Gluconeogenesis
gbm00020
Citrate cycle (TCA cycle)
gbm00620
Pyruvate metabolism
gbm00785
Lipoic acid metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
gbm01210
2-Oxocarboxylic acid metabolism
Module
gbm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Gbem_0461 (bkdF)
00020 Citrate cycle (TCA cycle)
Gbem_0461 (bkdF)
00620 Pyruvate metabolism
Gbem_0461 (bkdF)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Gbem_0461 (bkdF)
Enzymes [BR:
gbm01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.12 dihydrolipoyllysine-residue acetyltransferase
Gbem_0461 (bkdF)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
HlyD_D23
Biotin_lipoyl_2
HlyD_3
DUF6649
Motif
Other DBs
NCBI-ProteinID:
ACH37490
UniProt:
B5EBM1
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All DBs
Position
554561..555781
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AA seq
406 aa
AA seq
DB search
MSIDFKLPDLGEGIAEVELRRWLVAEGDAVAEHQPLVEVETDKAVVEVPSPRAGVVARLH
CKEGETVQVGATLVTFAEAKEAAKKEEPEGERRPAQRPPSVGIVGSLPEPEEEATPAAPA
GFEGLATPMVRKMARERGIDLKSVRGTGPRGCIKPEDLDQVPLAAQKAKPAPPDGERVPL
RGLRRTIARNVLASQRTTAFVTSMEEVDITDIWEMRGREQGEVESRGAHLTFLPFFIKAV
QHALREHPLLNGSIDDEAQELVLKKHYHFGIAVDTPEGLMVPVIRDVDKKSIIELAQAVQ
ELGRKARERSISLEELRGSSFTITNYGHFGGTFATPIINWPDVAIMGFGRIVERPWVHRG
QIAIRKILPLSLTFDHRATDGADAARFLGKVLRYLEDPALLFLDSA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgatttcaaactccccgatctgggcgaaggcatcgccgaggtggaactgcgc
cgctggctggtggcggaaggggatgctgttgcggaacaccagccgctggtcgaggtggag
acggacaaggcggtggtcgaggtcccatccccgcgcgccggtgtcgtcgcccgccttcac
tgcaaggagggggagacggttcaggtcggcgccacgctggtgactttcgccgaggcgaag
gaggccgccaagaaagaggagcccgaaggggagcgcaggccggcgcagcgcccgccctcg
gtcggcatcgtcggctcgctgccggaaccggaggaggaggcaactccggccgcaccggcg
gggttcgagggactggcgaccccgatggtgaggaagatggcccgggagcggggtatcgac
ctgaaaagcgtgcggggcaccgggccgcgcggctgcatcaagcccgaggatctggaccag
gttcccctggcggcgcagaaagcgaagccggcgccgccagacggggaacgggtgccgctc
agaggcctgcggcgtaccatcgcccggaacgtgctggcctcccaaaggaccaccgccttc
gtcaccagcatggaagaggtcgacattaccgacatatgggagatgcgggggcgcgagcag
ggggaagtggagtcgcggggggcgcacctgaccttcctccccttcttcatcaaggcggtc
cagcatgcgctgcgcgaacacccgcttttgaacggctccatcgacgacgaggcgcaggaa
ctggtgctgaaaaagcactaccatttcgggatcgcggtggacaccccggaggggctcatg
gtcccggtgatccgggacgtggacaagaagagcatcatcgagctggcgcaggcggtccag
gaactcggccgcaaggcgcgcgagcggagcatttcgttggaggaactgcgcggcagcagt
ttcaccatcaccaactacggccacttcggcggcaccttcgccactcccatcatcaactgg
cccgacgtcgccatcatgggctttgggcgcatcgtagaacgcccctgggtgcaccggggc
cagatcgccatcaggaagatcctgccgttgtcgctcaccttcgaccaccgcgccaccgac
ggcgccgacgccgccaggttcctgggcaaggtgctccgctacctcgaggaccccgcgctc
ctcttcctggacagcgcctag
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