Citrifermentans bemidjiense: Gbem_0489
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Entry
Gbem_0489 CDS
T00749
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00470
D-Amino acid metabolism
gbm00550
Peptidoglycan biosynthesis
gbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gbem_0489 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gbem_0489 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Gbem_0489 (murD)
Enzymes [BR:
gbm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Gbem_0489 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Precursor biosynthesis
Amino acid ligase
Gbem_0489 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Shikimate_DH
2-Hacid_dh_C
NAD_binding_7
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
ACH37518
UniProt:
B5EBP9
LinkDB
All DBs
Position
590464..591822
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AA seq
452 aa
AA seq
DB search
MELKDKKILVVGLAKTGVAVTRFLAQAGAFVTVTDMREEEALSDVLAELSDLDITYELGR
HVPYSFLMADLIVVSPGVPMDIKPLEMARSQKRRVVSEVELASWFIKAPMVAITGTNGKT
TTTTLTGEIFKACGFETFVGGNIGNPLIELAESGQEVSRVVVELSSFQLEGVESFRPDVA
VLLNITEDHLDRYHSFQEYIDAKLRIFENQTADDFAVLNIDDPLVAACASKLKAQLFPMS
RLHELEEGISYRDGFITFSHKGKVLRFGTEGFKLKGVHNLDNIMASLASTLLMRCDGDCA
YEAVKNFKGLPHRMELVEEIDGVAYYEDSKGTNVGSVVKSLESFDSGITLIAGGKDKGGS
YEPLAPLVESRVSHLVLIGEAKARMNEALGSLTDTHLAETLEEAVEISRRLTKPGGVVLF
SPACSSFDMFKNYEERAQRFKAAVRAGKKGEA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaaggacaagaaaatactggtggtgggactggcgaagaccggcgtggcggtg
acccgcttcctggcgcaagccggtgccttcgtcaccgttaccgacatgcgggaggaggag
gcgctctccgacgttctggccgagctctccgacctggatattacctacgaactcgggcgc
cacgtcccctacagcttccttatggcggatctgatcgtggtctcacccggcgtccccatg
gacataaagccgctggagatggcccgctcgcagaagcggcgcgtggtgagcgaggtggaa
ctcgcctcctggttcatcaaggcccccatggtcgccatcaccgggaccaacggcaagacc
acgacgacgacccttaccggcgagatcttcaaggcctgcggcttcgagaccttcgtgggg
gggaacatcggcaatcccctgatcgagctggccgaaagcggccaggaggtatcaagggtg
gtggtggaactctcctccttccagctggaaggggtggaaagcttccggccggacgtggcg
gtgcttttgaacatcaccgaggaccacctggaccgctaccacagcttccaggagtacatc
gacgcgaagctccgcatcttcgagaaccagaccgcggacgacttcgccgtcctcaacatc
gacgacccgctggtcgctgcctgcgcctccaagctcaaggcgcagctcttccccatgagc
cgcctgcacgagctggaagaagggatcagctaccgcgacggcttcatcaccttctcccac
aaggggaaagtgctccgcttcggcaccgaggggttcaagctgaagggggtgcacaacctg
gacaacatcatggcgagccttgcctccaccctcctcatgcgctgcgacggcgactgcgcc
tacgaggcggtgaagaacttcaaggggctgccgcaccggatggaactggtggaagagatc
gacggcgtcgcctactacgaggacagcaaagggaccaacgtcgggagcgtggtgaagtcg
ctggagagcttcgactccggcatcaccctcatcgccggcggcaaggacaagggaggctcc
tatgagcccctggcccccctggtcgagagccgagtgagccacctggtgctgatcggcgag
gcgaaggcacgcatgaacgaggcgctaggctccttgaccgatacccatctcgccgaaacc
ctcgaggaggcggtggagatctcgcgcaggctgaccaagccgggcggggtggtgcttttc
tcgccggcctgctccagcttcgacatgttcaagaactacgaggagcgcgcccagcgcttc
aaggccgcggtgcgcgccggcaagaagggggaggcgtga
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