Citrifermentans bemidjiense: Gbem_0494
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Entry
Gbem_0494 CDS
T00749
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00470
D-Amino acid metabolism
gbm00550
Peptidoglycan biosynthesis
gbm01100
Metabolic pathways
gbm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gbem_0494 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gbem_0494 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Gbem_0494 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Gbem_0494 (ddl)
Enzymes [BR:
gbm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Gbem_0494 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gbm01011
]
Precursor biosynthesis
Amino acid ligase
Gbem_0494 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACH37523
UniProt:
B5EBQ4
LinkDB
All DBs
Position
596677..597594
Genome browser
AA seq
305 aa
AA seq
DB search
MTVEELKKKKIAVLMGGLSAEREVSLNSGKAVLASLVKQGFRAVGIDVGRDLPQRLAEEQ
VELAFIALHGRFGEDGSVQGLLELMGIPYTGSGVLASALAIDKIASKVIFASAGLKLAPY
QVLRRGEELKLANPLPVVVKPSREGSSVGVGIVRDPSRMQAALDEAFRYDSEILIEGFID
GREVQVGILNGKALGAIEIIPKGEFYDYEAKYTDGGAQHILPARLPEAVYAEVLRQGEKA
HAALGCDCYSRVDFLVTETGDCFLLEVNTLPGMTDLSLLPEIAGGAGIAFGELVLRILQA
ASLKI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagaggagctgaaaaagaagaagatcgcggtgctgatgggtggactttccgcc
gagcgcgaagtgtccctcaacagcggcaaggcggtccttgcctccctggtcaagcagggt
ttccgggcggtggggatcgacgtcggtcgcgacctgccgcagcggctggccgaggagcag
gtggaattggccttcatcgcgctgcacggccgcttcggcgaggatggctcggtccaggga
ctcctggaactgatgggcatcccctataccggctccggggtacttgccagcgccctcgcc
atcgacaaaatagcttccaaggtcatcttcgcctccgccgggctgaagctcgctccctac
caggtgctgcgccggggcgaggagctcaagctagccaacccgcttccggtcgtggtgaag
ccttcccgcgaaggctcctccgtcggagtcggcatcgtgcgcgacccttcccggatgcag
gcggcgctcgacgaggcgttccgctacgactccgagatcctcatcgagggtttcatcgac
ggtcgcgaagtccaggtcggcatactgaacggcaaggcgctgggcgccatcgagatcatc
cccaagggggaattctacgactacgaggcgaagtacaccgacggcggcgcgcagcacatc
ctgccggcgcgcctccccgaggcggtctacgccgaggtgcttcgtcagggtgagaaggcg
cacgcggcgctggggtgcgactgctacagcagggtcgacttcctggtcaccgaaacgggc
gactgcttcctcttggaggtgaacaccctccccgggatgacggacttaagccttcttccc
gagatagcggggggagccggaatcgctttcggcgagttggtactgcgcatactgcaggcg
gcatcgctgaagatctag
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