Citrifermentans bemidjiense: Gbem_0706
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Entry
Gbem_0706 CDS
T00749
Symbol
lpdA-1
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00010
Glycolysis / Gluconeogenesis
gbm00020
Citrate cycle (TCA cycle)
gbm00260
Glycine, serine and threonine metabolism
gbm00280
Valine, leucine and isoleucine degradation
gbm00310
Lysine degradation
gbm00380
Tryptophan metabolism
gbm00620
Pyruvate metabolism
gbm00630
Glyoxylate and dicarboxylate metabolism
gbm00640
Propanoate metabolism
gbm00670
One carbon pool by folate
gbm00785
Lipoic acid metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
gbm01210
2-Oxocarboxylic acid metabolism
gbm01240
Biosynthesis of cofactors
Module
gbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gbm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
gbm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Gbem_0706 (lpdA-1)
00020 Citrate cycle (TCA cycle)
Gbem_0706 (lpdA-1)
00620 Pyruvate metabolism
Gbem_0706 (lpdA-1)
00630 Glyoxylate and dicarboxylate metabolism
Gbem_0706 (lpdA-1)
00640 Propanoate metabolism
Gbem_0706 (lpdA-1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gbem_0706 (lpdA-1)
00280 Valine, leucine and isoleucine degradation
Gbem_0706 (lpdA-1)
00310 Lysine degradation
Gbem_0706 (lpdA-1)
00380 Tryptophan metabolism
Gbem_0706 (lpdA-1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Gbem_0706 (lpdA-1)
00670 One carbon pool by folate
Gbem_0706 (lpdA-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gbm04147
]
Gbem_0706 (lpdA-1)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Gbem_0706 (lpdA-1)
Exosome [BR:
gbm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Gbem_0706 (lpdA-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
NAD_binding_8
HI0933_like
FAD_binding_2
DAO
AlaDh_PNT_C
GIDA
Thi4
FAD_binding_3
UDPG_MGDP_dh_N
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ADO00768
UniProt:
E1P673
LinkDB
All DBs
Position
join(836754..837164,837166..838167)
Genome browser
AA seq
470 aa
AA seq
DB search
MAEEIFDLVVIGAGPGGYVAAIRAAQLGMTVAVVEKRGTLGGVCLNEGCIPSKALLDSSE
LFHLAGHRFSAHGIEVAPPTLNLGQMMARKDDVVKKLTDGVTYLFKKNKIRSVNGTARLA
GSEAGGVHKVEVQGAQGGEQILAKKVLLATGSDAVELPSLPFDGEAVVSAREALSFGKVP
EHLLVVGGGYIGLELGSVWLRLGAQVTVVEMLPRLIAGSDGQVAEALLRSLKKQGMRFLL
GGKVAGVEKREGALLARVEVEGAVQEISCDKVLVAVGRRPLTEGLGLEELGVALGKGRVQ
VNEEYQTSVPGIYAIGDLIAGPMLAHKAMEEGAVCVERMRGEPSQVDYGCVPGVCYTWPE
AASVGKTEDALKEEGIPYKSGKYNFMGNGRAKCMDETEGFVKVLSDAEGTRLLGVHIFGP
RASDMIVEAVTVMSFGGSSEDIALIMHAHPTLSEAMKEAALDVDKRAIHG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaattttcgatctggtggttatcggggcggggcccggcggctacgtcgcc
gccatacgcgcagcgcagctggggatgacggtggcagtggtggagaagcgggggacactc
ggtggcgtctgcctcaacgaggggtgcatccccagcaaggcgctccttgactccagcgag
ctctttcatctggccgggcaccgcttctccgcgcacggcatagaggtggcgcccccgacc
ctcaacctcgggcagatgatggccagaaaggacgacgtggtgaagaagctcaccgacggc
gtcacctacctcttcaagaaaaacaagatcaggagcgtgaacggcacggcaaggcttgcc
ggcagcgaggcgggcggggtgcacaaggtcgaggtgcagggagcgcaggggggggagcag
atcctcgccaagaaggtgcttctcgccaccggcagcgacgcggtagagcttccctccctt
cctttcgacggcgaagccgttgtgagcgcccgcgaggccttgagtttcggcaaggtcccg
gaacacctcctcgtcgtcggtggcgggtacatcggccttgagctcggttcggtctggctc
aggctcggcgcccaggtcaccgtggtggagatgctcccgcggctcatcgccggtagcgac
gggcaggtggcggaggcgcttttgcgttcgctcaagaagcaggggatgcgctttttgctg
ggtggcaaggtggccggtgtcgaaaagcgcgaaggggctttgctggcgcgggtggaggtc
gagggtgccgtgcaggaaataagctgcgacaaggtgctggtggcggtggggcgcaggccg
ctgacggaggggctgggcctggaagagctgggcgtcgccctgggaaaagggcgggtccag
gtgaacgaagagtaccagaccagcgtccccggcatctacgccatcggagacctgatagcg
ggaccgatgctggcgcacaaggccatggaggagggggcggtctgcgtcgagaggatgcgc
ggggagccgagccaggtggattacggctgcgtccccggcgtctgctacacctggcccgag
gctgcgtcggtggggaaaaccgaggatgccctcaaagaagagggtatcccctataaaagc
ggcaagtacaacttcatgggcaacgggcgcgccaagtgcatggacgagaccgaaggtttc
gtcaaggtgctctccgacgcggaagggacgcggcttctaggggtgcacatcttcggcccg
cgcgcctcagacatgatagtcgaagcggtcaccgtgatgagcttcggcggcagcagcgag
gacatcgccctcatcatgcatgcccacccgaccctctccgaggcgatgaaggaagcggcg
ctggacgtggacaagagggcgatacacggctga
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