Citrifermentans bemidjiense: Gbem_0808
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Entry
Gbem_0808 CDS
T00749
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gbem_0808 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_0808 (ung)
Enzymes [BR:
gbm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Gbem_0808 (ung)
DNA repair and recombination proteins [BR:
gbm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gbem_0808 (ung)
Prokaryotic type
Gbem_0808 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACH37831
UniProt:
B5EET5
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All DBs
Position
957817..958512
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AA seq
231 aa
AA seq
DB search
MTTERQIQLEAGWKSHLLEEFQKLYMSELKEFLRLEIARKKTIYPKGSEYFNAFNSTSFD
KVKVVVLGQDPYHGPGQAHGLSFSVPRGVDIPPSLVNIFKEIQTDLGLTQEDFRHGYLKS
WADQGVLLLNSVLTVEAGRAASHQAKGWEIFTDRAVSMLNEKKDHLVFMLWGAYAQRKGG
VIDEKRHLVLRAPHPSPLSAHRGFLGCRHFSQANAYLARHGRDPIDWRLPD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggaaagacagattcaactggaagctggctggaaatcgcacttgctggaggag
ttccagaagctttacatgtctgagttgaaggagttcctgcgccttgagatagcgcgcaag
aagaccatctatcccaaggggagcgagtacttcaacgccttcaactccacctcctttgat
aaagtgaaggtggtggtgctcgggcaagatccctaccacgggccgggccaagcccacggg
cttagcttctccgttccgcgcggggtagatattccgccttcgctggtgaacatcttcaag
gagatccagacggatctcgggcttacgcaggaggacttcaggcacggctacctgaagtcc
tgggcggaccagggcgttcttctcttgaacagcgtgctgacggtcgaggctggacgcgcc
gcttcccatcaggcgaaggggtgggaaatcttcaccgaccgcgccgtctcaatgctcaac
gagaagaaggatcacctcgttttcatgctttggggagcctacgcccagagaaaagggggc
gtaatcgacgagaagaggcacctggtactgagggcgccgcatccgtcgcccctgtccgct
caccgcggtttcctcggttgccggcacttctcccaggccaacgcctacctggcacggcac
ggaagggatcctatagattggcgtctccccgactag
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