Citrifermentans bemidjiense: Gbem_0872
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Entry
Gbem_0872 CDS
T00749
Name
(GenBank) P-loop-containing kinase UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbm03019
]
Gbem_0872
Messenger RNA biogenesis [BR:
gbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Gbem_0872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_16
AAA_22
AAA_29
AAA_28
CPT
nSTAND3
APS_kinase
ABC_tran
KTI12
DUF815
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACH37895
UniProt:
B5EEZ9
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All DBs
Position
1027520..1028383
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AA seq
287 aa
AA seq
DB search
MRIVIITGLSGSGKSTAVRALEDEGFFCLDNLPVSLVTTFIELVEHSREDIKDVALVMDI
RSRDFIKGYDQVFQAIASAGHSVKIFYFDATDEVLIRRFSETRRRHPALEGATVPEGIRF
ERDQLAGLRRIATAIIDTSEMNVHRLKELVIGLVKGGEGVLEMQVNLQSFGFRYGLPLES
DLVMDVRFLPNPYFVATLRPFSGLDQGVREYVMGHKETVVFLEHFRDMLELLLPSYRREG
KSYLSVSIGCTGGRHRSVAIAEELYNYFRQRNVNIKITHRDIDKGLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcatcataaccgggctctcgggctcgggaaaatccaccgccgtgcgcgcc
ctggaggacgaggggttcttctgcctggacaacctcccggtctccctcgttaccaccttc
atcgaactggtagagcactcgcgcgaggacataaaagacgtagctctcgtgatggacatc
cgctcccgcgacttcatcaaggggtacgaccaggtcttccaggccatcgcctccgccggg
cacagcgtcaagatcttctacttcgacgcgaccgacgaggtgctgatccgccgcttctcc
gagacccggcgccggcacccggcgcttgagggggcgacggtccccgagggtatccgcttc
gagcgcgaccagctagcgggcctaaggcgcatcgccacggcgatcatcgacacctccgag
atgaacgtgcaccgcctgaaagagctggtgatcgggctggtaaaggggggggagggtgtg
ctggagatgcaggtgaacctgcagtccttcggcttccgctacggcctgccgctggagagc
gacctggtcatggacgtgcgctttctcccgaacccctacttcgtggccacgctgcgccct
ttctcggggctggaccagggggtgcgggagtacgtcatggggcacaaggaaacggtggtc
ttcctggagcacttcagggacatgctggaactcctgctccccagttaccgcagggagggg
aagtcgtacctctcggtctccatcggctgcaccggcggcaggcaccgctcggtcgccatc
gcggaggagctttacaactacttccgccagagaaacgtgaacatcaagattacacacagg
gacatagataaggggttgggatga
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