Citrifermentans bemidjiense: Gbem_1275
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Entry
Gbem_1275 CDS
T00749
Symbol
hup-2
Name
(GenBank) histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbm03032
]
Gbem_1275 (hup-2)
03036 Chromosome and associated proteins [BR:
gbm03036
]
Gbem_1275 (hup-2)
03400 DNA repair and recombination proteins [BR:
gbm03400
]
Gbem_1275 (hup-2)
DNA replication proteins [BR:
gbm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Gbem_1275 (hup-2)
Chromosome and associated proteins [BR:
gbm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Gbem_1275 (hup-2)
DNA repair and recombination proteins [BR:
gbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Gbem_1275 (hup-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACH38294
UniProt:
B5EI30
LinkDB
All DBs
Position
1473762..1474037
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAELVSAIAEEAQLTKVDAEKSLMGILDALTNCLATGDKVTLVGFGTFSVAERAARTG
QNPQTGKKIEIAASSAPKFKPGNTLKDLVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcagagctggtaagcgccatagcagaagaagcccagttaaccaaggttgat
gctgagaagtccctcatgggaattttggacgcactgaccaactgcctcgccaccggcgac
aaggtgaccttggtaggtttcggtaccttcagcgtcgccgagcgcgccgccaggaccggc
cagaatccgcagaccggcaagaagatcgagattgccgcttcgtctgcgccgaagttcaag
ccgggcaacaccttgaaggacctggtaaacagctaa
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