Citrifermentans bemidjiense: Gbem_1306
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Entry
Gbem_1306 CDS
T00749
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbm03016
]
Gbem_1306 (truB)
Enzymes [BR:
gbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Gbem_1306 (truB)
Transfer RNA biogenesis [BR:
gbm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Gbem_1306 (truB)
Prokaryotic type
Gbem_1306 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACH38325
UniProt:
B5EI61
LinkDB
All DBs
Position
1509467..1510354
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AA seq
295 aa
AA seq
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MLNGFFVIDKPAGVTSHDIVSKVRRAINQKKVGHTGTLDPFATGVLPVAVGEGTKAIQFL
DESEKEYRAVMRLGIATDTQDLTGQVLAERDWSQLEAADLERLVPQFLGLQKQMPPMFSA
IKQGGVPLYKLARKGIEVEREAREVEIHSLSFDWIRLPEACFTVTCSRGTYVRTLACDIG
EALGCGAHLLELRRTRSGLFREKDAISIEALAAAANQQDLILPLDRALDHLRRLELSEAG
GRKVQNGVVPLAADFTEATGEFQQGEQVRLYQGERFAAVAEYDMLKGLRLARVFN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacggcttttttgtgatcgacaagccggccggtgtcacctcgcatgacatcgtg
tccaaggtgcgtcgcgccatcaaccagaaaaaagtggggcatacgggaacgctcgacccc
ttcgccacaggcgtgctgcccgttgccgtgggcgaagggaccaaggcgatccagttcctg
gacgagtcggagaaggagtaccgcgccgtaatgaggctcggtatcgccaccgacacccag
gatctcaccggccaggtgctggcggagcgcgactggtcgcagttggaagcagccgacctg
gagcggctggtgccgcagtttctgggtctccaaaagcagatgcctcccatgttttcggcc
atcaagcaggggggcgttccgctctacaagctggccagaaaggggatcgaggtggagcgc
gaggcgcgcgaggtggaaatccactcgcttagctttgactggatccgcctacccgaggcg
tgcttcaccgttacctgctcgcgcggcacctacgtgaggacccttgcctgcgacatcggc
gaggctcttgggtgcggggcgcacctgttggagctgcggcgcacaaggagcgggcttttc
cgcgaaaaagacgccatcagcatagaggcgctggctgcggccgcgaaccagcaggacctg
atcctcccgctggaccgggcgctcgaccacctgcgcaggctggagctgtccgaggcgggg
gggaggaaggtgcaaaacggcgtggtgccgctagctgccgatttcaccgaggcgactgga
gagtttcagcagggcgaacaggtgcgactctatcagggggagcgcttcgctgcagtagcc
gagtacgacatgctcaaagggctgcgattggcgcgtgtattcaactag
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