Citrifermentans bemidjiense: Gbem_1371
Help
Entry
Gbem_1371 CDS
T00749
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Gbem_1371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5122
Glucodextran_B
MBG_2
Rax2
Cadherin-like
Big_13
SnoaL_4
Motif
Other DBs
NCBI-ProteinID:
ACH38390
UniProt:
B5EIM5
LinkDB
All DBs
Position
1582707..1587473
Genome browser
AA seq
1588 aa
AA seq
DB search
MKPRPLLLLLVALILSLFAGRAQAAVSSLRDGFDIYSSVKISGAGIRSVAVQPWDGKVII
GGSFTLTGGTPVTTRVNLARLNPDGTLDTTLNYNPQGSVNAIAIQWNQANSALSSIFIGG
AFAKIATPEGDLDRNALARIRSGDGFLEDFDPITSAAAVVNALVLPQGSSDIVVGGSFSQ
VSHTAPCSNIAKISLADGTLKSSFSGGVSGGQVFAIALQNGKVVAGGSFTGSAGYLARFT
SAGLPDPSFSAYPDGPVRALAVQVDGRLVLGGDFTGIHIGPGRVFHPREHLARTAGDGTI
DDFNPAPDGGVAAVALQPDGKIVIGGEFTKIAKPGPALPASSRNHAARLNIDGTLDGFDP
APDLKVAAALVQLDGKILIAGDFDNVAGAPRTKLARFYPEGHLDEDAVAIGTKIVSLMDT
ADIGANILTFYAHPDGKMDIGGLFSNVDGTLRNRFARLEKDWSLDLDPPGNLKLNNGVLV
IAPYLNGDILVAGQFGAMNGAPQNQVFRLKSNGDLDLDFNAKMNLLIAGEVMPGLQMARA
VGMTPTGDTLPDQTPKMDIFIAGGSSDPAYDEFGAELNPRFFLAKVDHAGDLDAAFAANV
YALPPSLIGGEITALTVQGRKVVIGTTEGVVLRLNENGTQDESFNELQLGSGMINTIQQT
ADGKLMVAGTFTSTYTGPDGKSWKRHILRIDNNGAIDNTFNVETTYIRPDGRELTGSFYA
IAVQTDGNMVVSGNFNTVRDGKETTAARWHISRLTPEGVLDPDFDYGFLGGKRADYNLNM
VNAVGKQLDGKLVMAGAFRSIGDDIEKRVLERFSDGWAPQEVAVQPDGKAVRWERRGTGP
EFARVTFEHSPDGVEWLPLGPAERVAGTANWELSGNGFDLGASGTLATRFLRARGYMTNH
RGGAGPIMETIRVFYLNPAPVKQEQTIDPGDFSDKTYGDPDFDPGGSSTSGLPLTYTSSD
PGVAVAVGGEIQITGAGTATITVSQGGDDSFEPAEDVTVSFTVAKAPLRVVADDKVRAFL
TPNPALSASYLGFVKGEGVSVLSGSPSLSTAALFESSVGEYAIAAALGTLSSQNYRFLPV
DGTLRIFRSCQEIYFPPIPERTFGDPPFTIVASACSGLTLSFASSDREVAQVNGQTVTIT
GAGSAVITVSQPGTGSLEPAPERLQPLVVHKSGQGVSFSSLAQKVVGDPPFPLQASATSA
LPVSYASSDPLVAEVTGNMVTIVGAGTCVITARQTGNNDFEPALPVSQPLTVASEGVAPE
LSLSTLSDGAVTSNPVLSLMGKASDLSGIATLTVNGEEVTAEAASFSSAVVLAPGSNSVS
VSALDRAGNRTTRTLNITLAPLAPVISVVFPADNSVTDTPSCAVKGSVTPGSAVTLWLNG
SSPQLLGVEQGSFTGSAYLSEGVNTIEISAELSGRSSRVKRSVTLSPGGPAIAITEPAQD
LRTERQSLTIRGSTTLQQPGSVTLEVDGVPFTPLISAGGFEQQVTLSRTGVIRIRARGGG
GAGESVVAQRNLIRVEMIPGDLDGNGSVDLQDAARLLRGSLGLEPMSAELFARGDLAPLV
NGIPQPDGVVDVGDVLVLLRRIVGLVDF
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaagaccgcttttgctcctgctggtcgcacttattctctcgcttttcgccggc
cgcgcccaagccgccgtctcgtccctgcgtgacggcttcgacatctacagcagcgtcaag
ataagcggcgccgggatccgctccgtcgcggtgcagccgtgggacggcaaggtgatcatc
ggcggctccttcaccctgaccggcggcactcccgtgaccaccagggtcaatctggcccgg
ttgaacccggacggcaccctcgataccaccctcaattacaatccccaagggagcgtgaac
gccatcgccatccagtggaaccaggcgaattccgccttgagctccatcttcatcggcggg
gcgttcgccaagatcgccacgcctgaaggggacttggatcgcaatgccttggcgcggata
agaagcggcgacggctttctagaggacttcgatcctatcacctcggccgcggccgtagtg
aacgcgctggtcctcccccaaggctccagcgacatcgtcgtcggcgggagcttcagccag
gtctcccacaccgccccgtgcagcaacatcgccaaaatctcgctcgccgacgggaccctt
aaatccagcttttcggggggggtaagcggcggccaggtcttcgccatcgcgctgcaaaac
gggaaggtggtggcgggcgggagcttcacagggagcgccgggtacctggcccgtttcacc
agcgccggtttacccgatcccagcttcagcgcctatcccgacgggccggtacgggcgctg
gcggtgcaggtggacggccggctggtgctagggggggatttcaccggtatccatatcggc
ccggggagggtattccacccccgcgagcacctggcgcgcaccgcgggcgacgggaccata
gacgatttcaatcccgctcccgacggcggcgtcgccgccgtggcgctgcagccggacggc
aagatcgtcatcggcggggaattcaccaagatagctaaacccggccctgccctccctgct
tcctcccgcaaccatgcggcccgcctcaatatcgacggcaccctcgacggtttcgacccc
gccccggacctgaaggtggcagccgccctggtgcagttggatggcaagatccttatcgcc
ggcgacttcgataatgtagcaggcgccccccgcaccaagctggcccggttttaccccgag
gggcatctcgatgaggatgcggtcgcgatcggaaccaagatagtctcgctcatggatacc
gccgacattggcgccaacatcctcaccttctacgcccacccggacgggaaaatggacata
ggcggactcttcagcaacgtagacggcacactcagaaaccgtttcgccaggctggaaaag
gactggagcctcgacttggatccgccgggaaacctgaagctgaacaacggcgtcctggtg
atagcgccctatctgaacggggacattctcgttgcagggcaattcggcgccatgaacggg
gcgccgcaaaaccaggtgttccgccttaaatcgaacggcgatctcgacttagatttcaat
gccaagatgaacctgttgatcgcgggagaggttatgcccggcctgcagatggcccgcgca
gtcgggatgacgccgacgggcgatacgctcccggaccaaacgccgaagatggatatcttc
atcgcaggcggcagctccgaccccgcatatgacgaattcggcgccgagctgaaccctcgt
tttttcctggcgaaagtggaccacgcgggcgatctcgacgccgccttcgcggcaaacgtg
tacgccttgcccccctccctgatcggcggggagatcacggctttgacggtgcaggggcgg
aaggtcgtgatcgggaccaccgaaggggtggtgctgcgcctgaacgaaaacgggacccag
gacgaaagctttaacgaactgcagctcggctccggcatgatcaacaccatccagcagacc
gccgacggcaaactgatggtggccggcaccttcacctccacctataccggccccgacggc
aagagctggaaaaggcacatcctcaggatcgataacaacggcgccatagacaacaccttc
aacgtcgaaaccacatacatcaggcctgacgggagggagctcaccggctccttctacgcc
atcgccgtgcagaccgacggcaacatggtcgtgtccgggaacttcaacacggtcagagac
ggcaaggaaactacggctgcgagatggcacatctcccgcctgaccccggagggggtgctc
gacccggacttcgactacggcttcctcggcggcaagagggccgattacaacctcaacatg
gtgaatgcagtcggcaagcagctcgacggcaagctggtgatggcgggcgctttccgcagc
atcggcgacgatatcgagaagagggttttggagcgcttcagcgacgggtgggcgccgcaa
gaggtggcggtacagccggacggcaaggcggtgcgctgggagcggcgcgggacgggcccg
gaatttgcccgggtgaccttcgagcattctccggacggcgtggagtggctccccctgggg
ccggctgagagggtcgccgggacggcgaactgggagctctccggaaacggcttcgacctc
ggcgcttcgggtacgcttgccacccgtttcctgcgcgcccgggggtacatgaccaaccac
aggggcggggccggcccgatcatggaaaccatccgggttttctatctcaacccggcgccg
gtcaagcaggagcagaccatcgatcccggcgatttcagcgacaagacctacggcgacccc
gacttcgacccgggcggaagctcaaccagcggcctgccgctgacctacaccagttccgac
cccggggtcgccgttgcggtcgggggagagatacagatcaccggcgccgggaccgccacc
atcacggtttcgcaggggggggacgacagctttgagcccgcggaagatgtcaccgtctcc
tttaccgtcgccaaggctccgcttcgcgtcgtcgccgacgacaaggtccgcgctttcctg
acgcccaaccccgcgctcagcgcgagttaccttgggttcgtcaagggggaaggggtgtcg
gttctttcggggagcccctcgctctcgaccgcggccttatttgagagcagcgtcggggag
tatgccatcgcggccgccctggggacgctctcttcgcaaaactaccgtttcctgccggtc
gacggcacgttgcgcatcttcaggtcctgccaggagatctacttcccccccataccggag
cggaccttcggcgaccccccctttactattgtcgcctcggcctgcagcggactcaccttg
agctttgcgagctcggatcgtgaggtggcgcaggtgaacgggcagacagtcaccataacc
ggcgctggaagcgcggtgatcaccgtgtcgcagccggggaccgggagcctggaaccggcg
cccgaaaggttgcagcccctggtggtgcacaagagcgggcagggggtctccttttcctcg
ctggcccagaaggtggtgggggatcccccctttcccctccaggcaagtgccactagcgcc
cttcccgtgagctacgcgagttccgatcccctggtcgccgaagtgaccgggaacatggtc
accatcgtcggggcggggacctgcgtcatcaccgcgcggcaaacaggcaacaacgacttc
gagcccgctctcccggtttcccagccgctgaccgtagccagcgagggggtggcgccggag
ctctccctctccacgctctcggacggggccgtgacctcgaacccggtgctgagcctcatg
ggaaaagcatccgacctctccggcatcgccaccctcacggtgaacggggaggaagtgacc
gccgaggcggcatctttcagctccgccgtcgttctcgcccccgggtccaactcggtcagc
gtctccgccctcgaccgtgccgggaaccggaccacccggaccctcaacatcacgcttgcc
cccctggcgccggtgatctcggtggttttcccggcggacaatagcgtcaccgacaccccc
tcctgcgccgtgaaagggagcgtcaccccggggagcgcggtcaccctctggttgaacggg
tcgtcgccgcagttgctgggggtggagcaaggtagcttcaccggcagcgcctacctttcc
gaaggggtgaacaccatcgagatctcggccgagctctccgggcggagttcacgggtgaag
cggagcgtgacgttatcgccgggcggacctgccatagcgatcacagagccggcacaggac
ctgcgcaccgagcggcagtcgctcaccatccgcggcagcacgaccctgcagcagccgggg
agcgtcaccctcgaggtggatggggtgccgttcaccccgctgatctcggcgggtgggttc
gagcagcaggtgacgctttcacggaccggcgtgatccgtatcagggccagggggggaggc
ggagcgggagaatcggtcgtggcgcagaggaacctgatccgggtcgagatgataccgggg
gacctggacggcaacggcagcgtcgacctgcaggacgctgcccggctgctgaggggatcg
ctggggctagagcccatgagcgcggagcttttcgcacgcggcgacctggccccgctggtg
aacggaattccgcagcccgacggtgtcgtcgatgtgggcgacgtccttgtgctgctgcgc
aggatcgtcgggctggtcgatttctag
DBGET
integrated database retrieval system