Citrifermentans bemidjiense: Gbem_1411
Help
Entry
Gbem_1411 CDS
T00749
Name
(GenBank) sigma-54-dependent sensor transcriptional regulator, PAS and GAF domain-containing
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gbm03000
]
Gbem_1411
Transcription factors [BR:
gbm03000
]
Prokaryotic type
Helix-turn-helix
Other families
Gbem_1411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
AAA_2
GAF
AAA
GAF_2
GAF_3
HTH_8
PAS_9
AAA_3
PAS_8
AAA_16
PAS
DUF815
AAA_19
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACH38430
UniProt:
B5EIR5
LinkDB
All DBs
Position
1625118..1627112
Genome browser
AA seq
664 aa
AA seq
DB search
MALSSDPAAEFFLGKFSNLEQLFGQAQFGVSIIDCDLRYIYVNDRMASINGVPPKEHLGK
TVREVDRFVALVVEPLLNRTIHEDHSFVDLEIRLSKPGDPQEKSWLICSYPLKESDGSVT
RCGLVVQDITEQKLRQSLQTERLQVEAFLSNLSSAFINVPVSEVDRKIEKALQKVVNFLG
FERSSIWHFTPDRSSLRITHSYALPGVKPPPTELMNLIPIWIEMIQLGESFRVSDVEELS
DKFWREKQYCKDQGGIKSIMFIPASVGGTIVGAITFVSYSVKKEWPDELTQRLRLLWEVF
ANALERKRADQKIQNALAEIRQLKDRLEAENVYLRDQIDVEYKHEEIIGKSEAIRNVLQQ
IQQVAPTDSTVLILGETGTGKELIARAIHNAGQRKARAMIKVNCAALPAALIEAELFGHE
KGAYTGAVSSQIGRFEAANGSTIFLDEIGELPLELQSKLLRVIQEGQFERLGNSKPVKAD
VRVIAATNVSLKQAVKEGKFREDLYYRLNVFPIFVPPLRDRQEDIPLLVWAMVEEFSKVF
GKTIERIPRKNMEIMERYLWPGNIRELRNLVERAMILSNGGTLVVDILDGSAAAANEPMT
MEAAERKHIGFILEKTGWRIRGKGGAAEILDMKPTTLHSRIKKLGVKRKNGTLEPPPAAE
KPTS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtcgagcgatcctgctgcggagtttttcctaggtaaattcagcaatttggaa
cagctgttcggtcaggcccagttcggtgtctccatcatagactgcgacctgcgctacatc
tacgtcaacgaccggatggcgtcgatcaacggcgtgcccccaaaagagcatctggggaag
accgtaagggaggtcgaccgcttcgtcgctctggtggtggagccgttgctgaaccggacc
atccatgaggatcattccttcgtggaccttgagatacggctgtcgaaaccgggcgaccct
caggagaaatcctggttgatctgctcttatcccctcaaggaaagcgacggttccgtgacc
cgctgcggcctggtggttcaggatataaccgagcagaagctaaggcagagcctgcagaca
gagcggctgcaggttgaggccttcctctcaaacctctcttccgccttcatcaacgtgccg
gtgagcgaggtggatcgaaagatagaaaaggcattgcaaaaggtcgtcaacttcctcggt
ttcgaaagaagcagcatctggcacttcacccctgatcgcagtagtttgcgcatcactcat
tcctacgcgctccccggcgtcaagccaccccccacagaattgatgaacctgatcccgata
tggatcgagatgatccagcttggggagagcttccgcgtctccgacgttgaggagctgtcg
gacaagttttggagggaaaaacaatactgcaaggaccagggcggcatcaagtccatcatg
ttcattcccgccagtgtcggcggcaccatagtcggcgccatcaccttcgtttcctacagc
gtcaagaaagagtggcccgacgagctgactcagaggctccgccttttatgggaagttttc
gccaacgccctcgagcgtaagagggccgatcagaaaatccagaacgccctggcggaaata
cgacagctgaaagaccgcctggaggcggaaaacgtctatctgcgcgaccagatcgacgtg
gaatataagcacgaggagatcatcggcaaatcggaggcgataagaaacgtgctgcagcag
atacagcaggtggcgccaaccgattccactgtgctcatcctgggcgaaaccggcaccggc
aaggaactgatagcgagggcgatccacaacgccggccagcgcaaggcacgcgccatgatc
aaggtgaactgcgccgcattgccggcagccctcatcgaggcggagctgttcggtcacgaa
aaaggggcctataccggagccgtatcctcccagatcgggcgcttcgaggcggctaacgga
tcgaccatcttcctggacgagataggggagctccccctggagctgcagtcgaagctgctg
cgggtcatccaggaagggcaattcgagcgcctgggaaattcgaagccggtcaaggcggat
gtgagggtgatcgccgcgaccaacgtgagcctgaagcaggcagtgaaggaaggaaaattc
cgggaggacctatattacaggctcaacgtcttccctattttcgtccccccgctgcgcgac
cggcaggaggacataccgctgttggtatgggcgatggtggaggagttctccaaggttttc
ggcaagaccatcgagcgcattcccaggaaaaacatggagatcatggagcgctacttgtgg
ccgggaaacataagggagctgagaaacctggtggaacgggccatgatcctcagtaacggc
ggcaccctggtggtggacattctggatggatccgccgcggccgcaaacgagccgatgacg
atggaggccgcggaaagaaagcatataggcttcatactggaaaagacggggtggcgcatc
cgcggcaagggtggcgcggccgaaattctcgacatgaaacccaccacgctgcattcccgg
atcaagaaactcggcgtcaaaaggaagaacggaacgctcgaaccgccccccgctgcagag
aaaccaacttcctga
DBGET
integrated database retrieval system
