Citrifermentans bemidjiense: Gbem_1525
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Entry
Gbem_1525 CDS
T00749
Symbol
selU
Name
(GenBank) tRNA (5-carboxymethylaminomethyl-2-seleno-U34)-2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbm03016
]
Gbem_1525 (selU)
Enzymes [BR:
gbm01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
Gbem_1525 (selU)
Transfer RNA biogenesis [BR:
gbm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Gbem_1525 (selU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_16
NB-ARC
AAA_22
NACHT
AAA_33
AAA_18
Viral_helicase1
AAA_28
AAA_23
NTPase_1
AAA_14
RsgA_GTPase
TsaE
PduV-EutP
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACH38543
UniProt:
B5E807
LinkDB
All DBs
Position
complement(1765184..1766224)
Genome browser
AA seq
346 aa
AA seq
DB search
METVPFNEELIDTHLVVDVRTPLEYEEDHLPGAINVPLLTNEERVEIGILHKETGPHAAR
RRGLELTAHRFPQMVEEIATAAAGRPILVYCWRGGLRSKTVTVILDLAGFKAVQLQGGYK
SFRHEVSEYFTPFTPKAPLVVLHGMTGIGKTTLLQRLKERGNSVLDLEGLACHRGSAFGQ
LGLNQTLTQKRFETLLWDEIRKAPAGRPLILEGESERIGRVSLPGDFYQKMAAGIRVWCH
AQLKTRVQRLIDEYGLPGYKEEMAVALQRIRKKLGGKRCEELAENLEKWELEPFMAGLVN
DYYDKVYYKNRSWEADTELGMEDFDQAAVELERYLSLRFKTDGASA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacagtaccatttaacgaagaactcatcgacacccatctcgtagtcgacgtacgc
acccccctggaatacgaggaggatcacctccccggcgccatcaacgtcccgcttctcacc
aacgaagagcgggtggagatcggcatcctgcataaagagaccggcccgcatgccgcaagg
agaagggggctcgagctcaccgcgcaccgcttcccgcaaatggtggaggagatagcgaca
gccgcggcgggaaggccgatcctcgtctactgctggcggggagggctcaggagcaagacg
gtcaccgtcatcctggatctcgccggcttcaaggcggtgcagctgcaaggagggtacaag
agcttccgccacgaggtgagcgagtacttcacccccttcacccccaaggcgccgctcgtc
gtcttgcacggcatgaccggcatcggcaagaccacgcttttgcagcgcctgaaagagcgc
ggcaactcggtgctcgatctggaggggctcgcctgccaccgcggttccgccttcggccag
ctgggattgaaccagaccctcacccagaagcgcttcgagacccttttgtgggacgagatc
aggaaggccccggcggggcgcccactcatcctggaaggggagagcgagcgcatcgggcgg
gtgtcgcttcccggggacttctaccagaagatggcggccggcatcagggtctggtgccac
gcgcagctcaagacccgggtgcagcggctcatcgacgagtacggtcttcccggctacaag
gaagagatggcggtagcgctgcagaggatccggaagaaactgggcgggaaaaggtgcgag
gagctggcggaaaacctggagaaatgggagctggagcccttcatggcgggacttgtgaac
gactactacgacaaggtctactacaaaaaccgcagctgggaggcggacacggagcttggc
atggaggatttcgaccaggcggccgtcgagctggagcgctatctatccctgcgtttcaaa
acggatggcgcgagcgcctga
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