Citrifermentans bemidjiense: Gbem_1536
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Entry
Gbem_1536 CDS
T00749
Symbol
pilY1-3
Name
(GenBank) type IV pilus assembly protein PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
gbm
Citrifermentans bemidjiense
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gbm02044
]
Gbem_1536 (pilY1-3)
02035 Bacterial motility proteins [BR:
gbm02035
]
Gbem_1536 (pilY1-3)
Secretion system [BR:
gbm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Gbem_1536 (pilY1-3)
Bacterial motility proteins [BR:
gbm02035
]
Pilus system
Pilus assembly proteins
Gbem_1536 (pilY1-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
DUF7265
Motif
Other DBs
NCBI-ProteinID:
ACH38554
UniProt:
B5E8G9
LinkDB
All DBs
Position
1781618..1786324
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AA seq
1568 aa
AA seq
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MGNRIEKLLIKTACLIALAAMLIPAVACAEDAGNPYCMAPPFISGGIKPNLLMLIDNSSS
MYDMGYIAGSNGTVPTYSCGSNLVSSAYCFDNTYDDTKEYEGYFSTFDPIANSSNYPFYQ
YSGGKFSVVAGLPATAADNVNIFKTSYVYVALSGDASATPSTRTVSTFVASGKFLNWLSA
SKFDIEKKILTGGKFDPTTSTLKGESRGCVGRRFVKVLPAIPKLSFAVRGPTSVEPNFDP
RTQGGQSTIEIFEGTYNATACQCAVYNWSNGSYGQASTDTKSCLGASPADNALATLNHTQ
QTCYVLKKKFADPTTSYDSDGWPTTGLNFNDIKVACNNVYLDNKNPIAPAALTDESNGNY
ICTSAAVHGIPTGRYIGPGSDTTGFVGRCWNGSSDKFGSGAGSDTCIKREILHYCMGTNF
AEVTDPTSIIPSSGNIPAVIMDAGVRAIGAPVGVFDAKVAVTSAPSGLVQQFSEDIRFGA
MKFNDFGSTTECGSTALPCPASGVTNKDASMMMTNSYIGSSIGDHSSGIVKDIDDVVAKT
WTPFAEGYYNAIAYFVKDATATTPTLSSTKFTARTTAPASIAAPVNSTDFDANRNPIQFR
CQQNNILIITDGSSTADQNATVMGKVLEGGTDGVFRDPSTTAEATTCGSYSGSPFLHDLS
YFAKHRNIFNPSQVCDPVGTDLCEAAQTIKTHVVFNAPPSSNTTDVCDSYNQMRLTALNG
GTTVNSAADPADLRTALKTALENVAAGASSGTAASILSNSEGSGANILQAVFFPKKVFES
QTSVDWIGEMQNLWYFVDPQISHSTIREDTPPGDLLKLNLQHDKVVSFRFSTADNTTYGY
LSQDTNGDGIADTAETKVDADDVNSLWRAGKILHARNVLSDPRNLYTPLISGGTELGSTG
LMRFSYGEGDPVRPDHSTLLTPYLQASSAANARDIMKYVQGFDNATMRSRTVKKWGIPAG
TVGSSTYLDDARLRGIGVWKLGDIISSTPRIQSVSKLNTYNLPAPSGYSDSSYSSYIGSN
EYKGRGMVYVGANDGMMHAFKLGLLRVNASGFEKASIDPDPDLGKEMWAYIPKNVLPYLN
YYPASNYHHLYYVDGASLLFDASIGTRTAASGGCTAANYWECTKLSSVVDSSNNLNSGNT
WRSVLIGGMGLGGASTKTCASGSNCVQTPITDPANGSLGFGYSSYFALDVTTPASPKLLW
EFNHADLGFATSGPAIIRVGPSNTNGHWYAVFGSGPTGPVDTENNQFMGRSNQTLKFFIV
DLLTGNLEHTIDTGITDAFAGSMIGSAIDADRWNQGVTGNYQDDAIYVGYTKKVSGTPDT
WTNGGVIRIMTKESSTPSTWGWSSVIENTGPVVTAIARLQDRKNKRLWLYFGTGRYYYRY
GSTVDDFSSRRAIYGIKEPCYNTNGRPGNYLDKDCSATITSGVTNQSDSVTAVGAGGWKI
DLANSTTANGAERVVTDAVALTNGTVFFTSFAPTADACGFGGNSYLWGLDYGTGGRPDDA
ALVGKALIQLSTGEFKEVDLAEAFGAGSARLGRVTGIPMTGKPPADAFPIVTKSGNKPVK
RIMHIQER
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgaatcgagaagctcttgataaagaccgcctgcctgatcgcgctggccgca
atgctcattcccgccgtggcctgcgcggaggatgccggcaacccttactgcatggcgccg
ccgtttatctccgggggaatcaagccgaacctgctgatgcttatcgacaattcctccagt
atgtatgacatggggtacatcgccggatccaacgggaccgtacctacctacagctgtggc
agcaacctcgtcagttcggcctactgcttcgacaacacctacgacgacaccaaggagtac
gaagggtacttctcgaccttcgaccccatcgccaacagcagcaactacccgttctaccag
tactccggcgggaaattctccgtggtcgcagggcttcccgccaccgcggcggacaacgtc
aacatcttcaagaccagctacgtctacgtggcgctttccggcgacgccagcgccaccccc
tccaccaggaccgtctccaccttcgtcgccagcggcaagttcctcaactggctttccgct
tccaagttcgacatcgagaagaagatcctcaccggcgggaagttcgacccaactacgagc
acgctcaagggggagtcgaggggatgcgtgggcaggagattcgtgaaggtgctcccggcc
attcccaagctctcctttgccgtcagggggcccacatcggtcgagccgaacttcgacccg
cgcacccagggggggcagagcaccatcgagatcttcgagggaacctacaacgccaccgct
tgccagtgtgcggtctacaactggagcaacggcagctacggccaggcctcaacggacacg
aagagttgcctgggcgcctcgcccgcggacaacgcgctggcgaccctgaaccatacccag
cagacctgctacgtgctgaagaagaagttcgccgaccccaccaccagctacgactcggac
ggctggcccaccacgggactcaacttcaacgacatcaaggttgcctgcaacaacgtctac
ctggacaacaagaatcccatcgcgcccgcggccttgaccgacgagtcgaacggcaactac
atctgtaccagcgcggcggtgcacgggattcccaccgggcgctacataggtccgggctca
gacaccacggggttcgtggggaggtgctggaacggctcttccgacaaattcggctcgggg
gccggatccgacacctgcatcaagcgtgagatcctgcactactgcatggggacgaacttc
gccgaggtaaccgaccccaccagcatcatccccagtagcggcaatatccccgccgtcatc
atggacgcgggggtgcgagccatcggggcgccggtcggggtgttcgatgccaaggtcgcc
gtcacttcagcgcccagcgggttggtgcagcagttctccgaggatatacgcttcggcgcc
atgaagttcaacgacttcggctcgaccacggagtgcggcagcaccgcgcttccttgcccc
gcaagcggcgtgaccaacaaggacgccagcatgatgatgacgaactcctacatagggtcg
tccatcggcgaccacagctccggaatcgtcaaggacatagacgacgttgtggccaagacc
tggactcccttcgccgaggggtactacaacgctatcgcctacttcgtcaaggacgccacc
gctaccacaccgacgctgagctccaccaagttcactgcgcggaccacggcgcccgcttcg
atcgcggcgccggtcaacagcaccgacttcgacgccaacagaaacccgattcagtttcgc
tgccagcagaacaacatcctgatcatcaccgacggctcctcaacggcagaccagaacgcc
accgtgatgggcaaggtgctggagggggggaccgacggcgtcttccgcgatcccagcacc
acggctgaggcgaccacttgcgggagctactccggcagtcctttcctccacgacctgagc
tacttcgccaagcaccgcaacatcttcaacccgagccaggtctgcgatccggtcggtacc
gatctgtgcgaggcggcgcagacaatcaagacgcacgtggtcttcaacgccccacccagt
agcaacaccaccgacgtgtgcgactcctataaccagatgaggttgacggccctaaacggc
ggcaccaccgtgaacagcgccgccgacccagccgacttgcgcaccgcactgaaaacggcc
ctggagaacgtcgccgccggcgcctcctccggtaccgccgcctccatcctcagcaacagc
gaggggagcggggccaacatcctgcaggcggtgttcttcccgaagaaggttttcgagagc
cagaccagcgtcgactggatcggagagatgcagaacctgtggtacttcgtcgacccccag
atcagccatagcaccatcagggaagacacccccccgggcgacctgctgaagctcaacctc
cagcacgacaaggtggtgagcttccgcttcagcaccgccgacaacaccacctacggctac
ctgtcccaagacacaaacggcgacggcatagcggacacggccgagacgaaggtggacgcg
gacgacgtcaacagcctctggcgcgccggcaagatcctccacgcccgcaacgtgctctcc
gatcccaggaacctctacaccccgctcatcagcggcgggacggagctgggcagcaccggg
ctgatgcgtttcagctacggcgagggggatccggtgcggccggaccattccacgctcttg
accccttacctgcaggcgagctccgcggccaacgcccgcgacatcatgaagtacgtccag
ggtttcgataacgccaccatgcgcagccggaccgtcaagaagtggggtattcccgcaggc
accgtggggagctcgacctacctcgacgacgccaggttgagggggatcggcgtgtggaag
ctgggggatatcatctcctcgaccccgcgcatccagtcggtcagcaagctgaacacctac
aacctccccgcacccagcggctacagcgacagttcttacagctcgtacatcggctccaac
gagtacaaagggcgcggcatggtctacgtgggggccaacgacggcatgatgcacgccttc
aagctggggctcttgcgggtgaacgccagcggcttcgaaaaggcaagcatcgaccccgac
ccggacctcggcaaggagatgtgggcctacatcccgaagaacgtgctcccctatctcaac
tactacccggcctccaactaccatcacctctactacgtggatggggcgagccttcttttc
gacgccagcataggcacacgtaccgccgcgtcgggcgggtgcacagccgccaactactgg
gagtgcacgaagctctcctcggtggtcgacagcagcaacaacctgaacagcggcaacacc
tggagaagcgtcctgatcggcgggatggggttgggcggcgcctcgaccaagacctgcgcc
agcgggtccaactgcgtgcagacaccgattacagatcccgccaacggcagtctcgggttc
ggctactcgtcctacttcgccttggacgtcaccaccccggcctctcccaagctgctttgg
gagttcaaccatgccgatctcgggtttgccacctccggcccggcaatcatccgggtagga
cccagcaataccaatgggcactggtatgccgtcttcggctccggccccaccggcccggtc
gacaccgagaacaaccagtttatggggcgctccaaccagaccctcaagttcttcatagtc
gacctgctgaccgggaatctggaacacaccatcgacaccggtataacggacgcctttgcc
ggctcgatgattgggtcggccatagatgcagaccgttggaaccaaggcgtcaccggcaat
tatcaggacgacgccatctacgtcgggtacaccaagaaggtctccggcacccccgacacc
tggaccaacggcggcgtgatcaggatcatgaccaaggagagctccaccccctcaacgtgg
gggtggagctcggtgatcgaaaacaccggcccggttgtcacggccattgccagactgcag
gaccgcaaaaacaagaggctctggctctacttcggcaccggcaggtactactaccgctac
ggcagcacagtcgatgacttcagttccaggcgcgccatctacggcatcaaggaaccttgc
tacaacaccaacggacgtccggggaactacctcgacaaagactgctcggcgaccataacc
agcggggttaccaaccagtccgattctgtaaccgccgttggcgccggcggctggaagatc
gacctggccaactccacgaccgccaacggcgccgagcgagtggtgaccgacgcggtggcg
ctaaccaacgggaccgtgttcttcacctccttcgcgccgacggccgacgcctgcggtttc
ggtgggaactcgtatctctgggggctcgattatggcacaggcggacgacccgatgatgcg
gcgctggtcggcaaggcgctgatccagctctccaccggcgagttcaaggaggtggatctc
gccgaggccttcggcgccggttcagctcgactggggcgggtaacgggaatcccgatgacc
gggaagcctccggctgacgccttccccattgtgaccaagagcggcaacaagccggtcaag
cggatcatgcacatacaggagcggtaa
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integrated database retrieval system
