Citrifermentans bemidjiense: Gbem_1552
Help
Entry
Gbem_1552 CDS
T00749
Name
(GenBank) lipoprotein, putative
KO
K20276
large repetitive protein
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Gbem_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
HYDIN_VesB_CFA65-like_Ig
DUF1573
Cep192_D3
Ig_CFAP65_4th
Cep192_D4
Ig_SIBA-E_2nd
ASH
Ig_CFAP65
K319L-like_PKD
Ig-CFAP74_4th
Motif
Other DBs
NCBI-ProteinID:
ACH38570
UniProt:
B5E8I5
LinkDB
All DBs
Position
1798928..1803562
Genome browser
AA seq
1544 aa
AA seq
DB search
MNLKRYARWILPLMIFAALIACSGQDGKQQAGAKKTTGKVLDVDQQVTTDSNDQAQPSVA
YDNVNHQFFSVWTDSRVAGATSIYGRFSFGQSLYSDGKLRFDNTTSHATKTGTPPMTLGT
EIRITDSSYVAPAAHRDQRQPKVAFYPDPDPAGPDNSKFLVVWTDSRNGYSQIFGQFISA
AGQYLNQAGAVTATPSNFAITEHVGTSFNGTVGVTGSSTFPVSNGTVSIAVGSPTAVVGA
GTTFTSITPGDVIVIQGVSYSVAAVADNTHLTLTTPYTLFPGGISVSGLHYYSFHATTPT
ATVTGAMTQFNADHITPGDKIAVNNVWYEVLSVDPAVEQLTLTTTAAMSFTGAGQSYRTT
AHLNQADPDIIYNTVTREFVVSWMDTSNRDTNNTMEITGSVCSNSTLVNYLPYPLVDDNV
IKYVTINPATGSLGAKQTVSSLVSQGELQESSSTITTSWSVQLAESKPKLAFNPSSGENY
VAWSGINGTVTMTLRYEVSSTTSTCIYKDAIFVASDVDATPKIKIRRNAGLGLVKDYSFG
TDATSPALALDPNTKRLLIAWEDNVNAANTGKDILGQIMDVTSFTPYRSPVNISNATGDQ
SSPTASFDPVNSRFFVAWEDARNQSANISNIDVYGQFIDPQGNLSGGNTIITVAPSNQLA
PAVAFGDVYFRKFMVVWTDGRLNNNSDISTQLLEYSTLPQLVVTDAQGIPIYSGSIDFGN
VDISTATPYKDISFKIRNEGNSQLTISLISDPAAPFSFITPKPATVSPGTSADMTIRFQP
TGAGSYAGNSTNGYKMAFNSDGGEAVIYLSGAGVGTQPLSIASTVLPDGTAGVAYPATTL
GANGGVIPYGNWTVTSGTLPPGLSLNNSTGVLSGTISPTALPTYSFTVSVTDHAAATSTK
TFTMNVTAMSISNTSLRSWTQLNPGYTDQLTASIGGVAIAPTKVTWAAVGPVPQGLVVNS
DGTVTSTATGPLIAGANTLTVSATYIDTGVTPNATYTATKTLNLTINPALSVTTTSLPAV
VVGANYSQPLVKLGGTPSYTWSLASGSLPPGLQMDLSTGAITGVPTGTGTFQFSVLLSDA
TGATTQRALSIQVNPTLSLSTTALDPVMSGAAYLQKLTAVGGTKPYRWTSSGNLPPGVAL
DAATGIISGTVTAGGEYYFYVRVTDYDGATVEKLYTVVVNTPGLPSSTIVYVDGTGSTVN
AYSFGSVMTGSRKPSASLKLKNTGSVPVMLSSISADTSEIVPYVPTGYQLDPGMSVPVEI
GFTPTAVKPYSGKVTITDSFGTTYPLTVTGNGVTSTAAIASGSGGITGSTALAYFTPPAS
FVSANKPSDFTISTVIGVRLDNVVPNGTVNVDVTFGSLPANPVFYKVTNGVWTPVPNPVA
RSGNVVTFAVQDNNPLHDSDNAPGFIQDPIVVGSIGAATDPTSGTGNNIAPPSSGGSSGG
GCFIATAAFGSYLDPQVVVLRHFRDNVLMKSAPGRAFVKFYYTYSPPVADFIYEHDLLRL
LTRWALTPLIFAVKYPLALLALPVLFAWRRMRGIQVPGRVEEKA
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaaaagatatgctcgctggatactccccctgatgatctttgcggcgcttatc
gcatgctccggtcaggacggcaagcagcaggctggggcaaagaagaccacaggcaaggta
cttgacgtcgaccagcaggtgacgacggactcgaacgaccaggcccagccgagcgtggcc
tacgataacgtcaaccatcagttcttctcggtctggaccgactccagggtcgccggcgcc
accagcatctatggccgcttctctttcgggcagagcctgtactccgacggcaagctccgc
ttcgataacaccacgagccacgcgaccaagacggggaccccgccgatgacgctggggact
gagatcaggatcaccgactcgagttacgtggcgccggccgcacaccgggatcagcggcag
cccaaggtcgccttctaccccgatcctgaccccgcaggccccgacaacagcaaattcctc
gtagtctggaccgactcccgcaacggctacagccagatcttcggccagttcatctccgcc
gcaggccaatacctaaaccaggccggcgcggtgactgccaccccctcaaacttcgccatc
accgagcacgtcggtacctccttcaacggcaccgtcggcgttaccggttccagcaccttc
ccggtaagcaacggtaccgtctccatcgctgtaggctcaccgacagcagtcgtcggcgca
gggaccactttcaccagcatcaccccgggagacgtgatcgttatccagggggtatcgtat
tcggttgcggcagtcgccgacaatacccacctcaccctgaccacgccttacaccttgttc
cccggcggcatttcggtgagcgggctccattattactccttccacgctactacgcccacc
gccaccgttaccggcgcaatgacgcaattcaatgccgaccacataaccccgggcgacaag
attgcggtgaacaacgtctggtacgaggttttgtcggttgaccccgctgtggagcaactt
acccttaccaccactgccgccatgagcttcaccggcgctgggcagagctaccggaccacg
gcgcacctgaaccaggccgaccccgacatcatctacaacacggtgacccgcgaattcgtg
gtcagctggatggacaccagcaaccgtgataccaacaacaccatggagatcacagggtcc
gtctgcagcaacagcaccctggtcaactacctcccgtaccccttagtcgacgacaacgtc
atcaagtacgtcaccatcaacccggccacggggtcgctgggtgcgaaacagaccgtctcg
tcgctggttagccagggcgagttgcaagaatcaagcagcaccatcaccaccagttggagc
gtgcagcttgccgagtccaagcccaagctcgctttcaaccccagctcaggcgaaaactac
gttgcctggagcggcatcaacggcaccgtgactatgacgctcaggtacgaagtgagctca
acaacttcgacctgcatctacaaggacgccattttcgtggcttctgacgtcgacgccacg
cctaagataaagatccgccgcaacgccggactggggctggtcaaggattacagcttcggc
accgacgcgacgtcgccggcgctggcccttgaccccaacacgaagagactgctgatcgcg
tgggaagacaacgtcaatgccgccaatacagggaaggacatcctggggcagatcatggac
gtcaccagcttcaccccgtaccggtcaccggtcaacatctccaacgcgactggcgaccag
agctctcctaccgcctccttcgaccccgtcaactcgaggttcttcgtggcgtgggaggac
gcgcgcaatcagagcgccaacatctccaacatcgatgtctacggccagttcatcgacccg
caggggaacctgtccggcggcaacaccatcatcactgtggcccccagcaaccagttggct
ccggccgttgctttcggagatgtctacttccgcaagttcatggtggtctggaccgacggc
aggcttaacaacaactccgacatcagcacacagcttctcgagtattccaccctgccgcaa
ctcgtagtaaccgacgcgcagggaattcccatttacagcggctcaatcgatttcggcaac
gtggacatctcgactgcgaccccctacaaagacatctcgtttaagattagaaacgaaggc
aactcacagctcaccatcagcttgatctcggacccggcggcaccattttccttcattacg
ccgaagccggccactgtcagccccggcaccagcgccgacatgaccatccgcttccaaccc
actggggctggatcctacgcagggaacagcaccaacggctacaagatggccttcaactcc
gacggcggcgaggccgtgatctacctctccggcgccggggtcggaacccagcctctctcc
atcgcgagcactgtccttcccgatggcaccgccggggtcgcctatccggccaccaccctc
ggtgccaacggcggcgtgatcccctatggcaactggaccgtaacctccggcacgctcccc
ccggggctttcgcttaacaacagtaccggcgtgctcagcggcacgatcagccctaccgct
cttccgacctacagcttcaccgtgtcggtcaccgaccacgccgcggcgaccagtacgaag
acgttcaccatgaacgtgaccgcgatgtccatcagcaacacctcgctccgctcctggacc
cagctaaaccccggctacaccgaccaactcaccgcttccatcggcggggtggctattgcc
cccacaaaggtaacctgggccgcagttgggccggtgcctcaaggactcgtggtcaacagt
gacggcactgtgacttccaccgcaaccggtcctctcatcgctggtgccaatacccttaca
gtttccgccacctatatcgatactggcgtgacgccgaacgcaacctataccgccacaaag
acgctgaacctgaccataaacccggctctctccgtcacgaccactagccttccagccgta
gttgtcggggctaactactcgcaaccgctcgtcaagctcggcggcacaccctcatacacc
tggagcctagccagcggttctcttcctccgggtctccagatggacctgagcaccggggca
atcaccggcgttcctaccggtaccggcactttccagttctcggtactgctgtccgacgcc
accggtgcgaccacacagcgagcgcttagcatccaggtaaaccccaccctgtctctgtcg
accaccgctctcgatccggtgatgtcaggggcggcctatctgcagaagctgaccgccgta
ggcggtactaagccttaccgttggaccagttcgggcaacctgccccccggcgtcgcgctt
gatgctgctaccggcattatcagcggtacggtcaccgcgggcggcgaatactacttctac
gtccgggtcaccgactatgacggcgccaccgtagaaaagctctacaccgtggtcgtcaac
accccgggtcttccctccagcaccatcgtctatgtagacggcactggcagcacggtcaac
gcctacagcttcggcagcgtcatgaccgggagccgcaaacccagcgcaagcctgaagctg
aaaaacactggatccgtgcctgtcatgctgtcgtccatcagtgccgatacttccgaaatc
gttccctacgttccaaccggataccaactcgaccctggcatgtcggtgcctgtcgagatc
ggtttcaccccgactgcagtcaaaccctacagcggcaaggtgaccatcaccgactccttt
ggaaccacctacccgctgaccgtgaccggcaacggcgtgacgtccactgccgccatcgcc
agcggcagcggcgggatcaccggctcaaccgcccttgcctatttcacaccccctgcaagc
tttgtctcagcgaataagcccagcgacttcaccatcagcacggtcatcggggtacgtctc
gacaacgtggtgccgaacggcactgtcaatgtcgacgtcaccttcggatcgctcccggca
aatccggtcttctacaaagtgaccaacggcgtctggaccccggtgccgaaccctgtggcg
cgcagcggaaacgtcgtcactttcgcagttcaggataacaacccgctccacgattccgac
aacgcccccggcttcatccaggaccccatcgtcgtcggcagcatcggcgccgcaaccgac
cccacctccggcaccggcaacaacatcgcccctccgagcagcggcggcagcagcggcggt
ggttgcttcatcgcgacggcggccttcggcagctacctcgacccgcaggtcgtggtgctc
cggcacttccgcgacaacgtgctcatgaagagcgcgccgggcagggcgttcgtgaagttc
tactacacctacagcccgccggtcgccgacttcatctacgagcacgacctcttgaggctt
ttgacccgctgggcgctcaccccgctgatctttgccgtcaagtacccgctggcacttctg
gcgctgccggtcctcttcgcctggaggcggatgcgcggcattcaggtgccgggccgagtg
gaagagaaggcataa
DBGET
integrated database retrieval system
