Citrifermentans bemidjiense: Gbem_1599
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Entry
Gbem_1599 CDS
T00749
Symbol
kdsB
Name
(GenBank) 3-deoxy-D-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00541
Biosynthesis of various nucleotide sugars
gbm01100
Metabolic pathways
gbm01250
Biosynthesis of nucleotide sugars
Module
gbm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Gbem_1599 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gbm01005
]
Gbem_1599 (kdsB)
Enzymes [BR:
gbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Gbem_1599 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
gbm01005
]
Lipid A
Gbem_1599 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
Peptidase_inhib_put
IspD
Motif
Other DBs
NCBI-ProteinID:
ACH38617
UniProt:
B5E8N2
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Position
1853407..1854174
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AA seq
255 aa
AA seq
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MRRQMKITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIA
AAVRAFGGRVEMTSPTHETGTDRLAEVAARIDADIIVNVQGDEPLIDPAMIDEAIRPLLD
DPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVS
GKLLCYKHVGLYVYRREFLPVFAGLQPTYLELAEKLEQLRVLENGYRIKIVETEFESIGV
DTPADLDKVLERLKG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgagacgccaaatgaaaataaccgcggtaatacccgccaggtatgcttctacgcgtttt
gaggggaaggccttggcggacatcatggggcgccccatggtgcagcatgtttacgagcgc
gcagcgaaggcgaccctcgtgtccgaggtgatagtggcgaccgacgacgagcgcatagcc
gccgccgtgcgcgccttcggcggcagggtcgagatgacctcgccgacccacgagaccggt
accgaccgcctggccgaggtggccgccaggatcgatgcggacatcatcgtgaacgtccaa
ggggacgagccgctgatcgatcccgccatgatcgacgaggcgatccggccgcttttggac
gatccgtccatcccgatggccaccttgaagtgcaggatcaagacgctgcacgactttctt
tccccgaacgtggtgaaggtcgtttccgaccccacggggaacgtgctctacttctcgcgt
tcgccgctcccctttttcagggacaagtggaacgatttgaaagacgacgccttcgtctcc
gggaagcttctctgctacaagcacgtaggtctctacgtctaccgcagggagttcctcccc
gtgttcgcgggattgcagccgacctacctcgagctcgccgagaagctcgagcagttgcgg
gttctggaaaacggctaccgcatcaagatcgtcgagaccgagttcgagtccataggcgta
gacaccccggcggacctggataaggtgctggaaaggctgaaaggctaa
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